Parental gene:

Aurka, ENSRNOG00000004479

Aliases:Aurka, ARK-1, Stk6
Description:aurora kinase A [Source:RefSeq peptide;Acc:NP_695208]
Organism:Rat (Rattus norvegicus)
Coordinates:3:176439962..176453986(-)


>ENSRNOG00000004479
ATGGACAGATGTAAAGAAAACTGTGTCTCTAGGCCTGTCAAGTCCACTGTTCCCTTCGGTCCGAAACGAGTCTTGGTGAC
TGAGCAGATTCCTTCTCAGCACCCAGGATCAGCGAGCAGTGGCCAGGCCCAGCGGGTCCTGTGTCCCTCCAACTCCCAGC
GTGTCCCTCCACAAGCACAGAAACCTGTCGCAGGTCAGAAGCCAGTGCTCAAGCAGTTGCCGGCTGCCAGCGGTCCTCGA
CCTGCTTCCCGGCTGAGTAACCCCCAGAAGAGTGAGCAGCCACAGCCTGCGGCCTCGGGAAATAATTCTGAAAAGGAACA
GACATCCATCCAGAAAACTGAAGACTCAAAAAAAAGGCAGTGGACTTTGGAAGATTTTGACATCGGCCGCCCACTAGGAA
AAGGGAAGTTTGGAAATGTCTACTTGGCGAGGGAGAAGCAAAGCAAGTTCATCCTGGCTCTGAAGGTGCTGTTTAAAGTA
CAGCTGGAGAAGGCAGGTGTGGAGCACCAGCTCCGGAGAGAAGTGGAGATCCAGTCCCACCTGCGGCACCCCAACATCCT
CAGGCTGTATGGGTATTTCCATGACGCCACCAGAGTTTATTTAATTCTGGAATACGCGCCCCTTGGAACAGTATATAGAG
AGCTTCAAAAACTCTCCAAGTTTGATGAGCAGAGAACAGCTACCTACATCACGGAGTTGGCGAATGCTTTGTCCTACTGC
CACTCAAAGAGAGTCATCCACAGAGACATCAAGCCAGAGAACCTGCTGCTTGGCTCAAATGGGGAGTTGAAGATCGCAGA
CTTTGGGTGGTCTGTGCATGCTCCGTCTTCCAGGAGAACCACGCTGTGTGGCACCCTGGACTACCTGCCCCCGGAGATGA
TTGAAGGTCGGATGCATGACGAGAAGGTGGACCTCTGGAGCCTGGGGGTGCTCTGCTATGAGTTCCTAGTGGGGATGCCT
CCTTTTGAGGCACACACTTATCAGGAGACCTACAGAAGGATATCACGGGTTGAATTCACATTCCCTGACTTTGTGACGGA
GGGAGCCAGGGACCTCATTTCAAGACTGTTAAAACACAACTCAAGTCAAAGGCTAACACTAGCGGAAGTCCTTGAGCACC
CTTGGATCAAAGCTAATTCTTCAAAACCTCCGACTGGCCACAATAGCAAAGAGGCAACTAGCAAATCGTCTTAG

Library Parental gene expression (RPM)
SRP017611_liver 5 .24 RPM
SRP017611_kidney 3 .07 RPM
SRP017611_brain 4 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029331 ortholog_one2one 3 retrogenes
retro_cfam_1027, retro_cfam_257, retro_cfam_764,
Choloepus hoffmanni ENSCHOG00000005976 ortholog_one2one 8 retrogenes
retro_chof_1302, retro_chof_1575, retro_chof_1709, retro_chof_2213, retro_chof_2389, retro_chof_259, retro_chof_565, retro_chof_764,
Cavia porcellus ENSCPOG00000006633 ortholog_one2many 1 retrogene
retro_cpor_106,
Felis catus ENSFCAG00000024493 ortholog_one2one 1 retrogene
retro_fcat_495,
Homo sapiens ENSG00000087586 ortholog_one2one 1 retrogene
retro_hsap_510,
Gorilla gorilla ENSGGOG00000007197 ortholog_one2one 1 retrogene
retro_ggor_470,
Myotis lucifugus ENSMLUG00000007925 ortholog_one2one 1 retrogene
retro_mluc_1931,
Macaca mulatta ENSMMUG00000000070 ortholog_one2one 1 retrogene
retro_mmul_431,
Mus musculus ENSMUSG00000027496 ortholog_one2one 1 retrogene
retro_mmus_2825,
Nomascus leucogenys ENSNLEG00000007029 ortholog_one2one 1 retrogene
retro_nleu_1553,
Otolemur garnettii ENSOGAG00000004441 ortholog_one2many 3 retrogenes
retro_ogar_2805, retro_ogar_3440, retro_ogar_980,
Pongo abelii ENSPPYG00000011148 ortholog_one2one 1 retrogene
retro_pabe_231,
Pan troglodytes ENSPTRG00000013646 ortholog_one2one 1 retrogene
retro_ptro_381,
Sus scrofa ENSSSCG00000007493 ortholog_one2many 1 retrogene
retro_sscr_936,
Ictidomys tridecemlineatus ENSSTOG00000011958 ortholog_one2one 2 retrogenes
retro_itri_366, retro_itri_772,
Tupaia belangeri ENSTBEG00000013284 ortholog_one2one 2 retrogenes
retro_tbel_1137, retro_tbel_2604,
Tarsius syrichta ENSTSYG00000009221 ortholog_one2one 1 retrogene
retro_tsyr_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_664 92.58 77.58
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2. retro_rnor_670 92.26 77.58
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Download FASTA sequences of all ENSRNOG00000004479 retrocopies