RetrogeneDB ID: | retro_mluc_1931 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429956:330168..330829(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AURKA | ||
Ensembl ID: | ENSMLUG00000007925 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.89 % |
Parental protein coverage: | 54.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KSKENGISGLVKTTIPSGDGPKRVLVTQQFPSQYPLPANSGQAQRVLCPSNSSQQVPSKAQKLVSSHKPV |
KSKE..I.G.VKTTIP.G.GPKRVLVTQQFPS..PL.ANSGQA.RVLCP.NSSQ..P..AQKLV.SHK.V | |
Retrocopy | KSKECCILGPVKTTIPPGGGPKRVLVTQQFPSRHPLSANSGQAERVLCPLNSSQRAPLQAQKLVCSHKQV |
Parental | LNLKQKQLQATSGPCPVSRPLNNTQKSEQPQPPAPGKNSEKEVASKQKNEE-SKKRQWTLEDFEIGRPLG |
.NLKQKQLQATS.PCPVSRPLNNT.KSEQPQP.APG.NSE...AS.Q.N.E...KRQ..LE..E.GRPLG | |
Retrocopy | QNLKQKQLQATSVPCPVSRPLNNT*KSEQPQPSAPGNNSEEKQASEQRNKE>FLKRQCALEGIENGRPLG |
Parental | KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQIRREVEIQSHLRHPNILRLYGYFHDATRVYLIL |
KGKFGN.YL.R.KQS..I..LK.LF.AQLEKAGV.HQ.RREVEIQSHLRHP.ILRL.GYFHDAT.V.LIL | |
Retrocopy | KGKFGNIYLMRDKQSEVI--LKALFNAQLEKAGVGHQLRREVEIQSHLRHPDILRLCGYFHDATIVHLIL |
Parental | EYAPLGTVYRELQ |
E.APL...YREL. | |
Retrocopy | EFAPLRASYRELK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000029331 | 3 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000005976 | 8 retrocopies | |
Cavia porcellus | ENSCPOG00000006633 | 1 retrocopy | |
Felis catus | ENSFCAG00000024493 | 1 retrocopy | |
Homo sapiens | ENSG00000087586 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000007197 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000003633 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000007925 | 1 retrocopy |
retro_mluc_1931 ,
|
Macaca mulatta | ENSMMUG00000000070 | 1 retrocopy | |
Mus musculus | ENSMUSG00000027496 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000007029 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000004441 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000011148 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000013646 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000004479 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000007493 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000011958 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000013284 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000009221 | 1 retrocopy |