Parental gene: | AURKA, ENSCAFG00000029331 |
| Aliases: | None |
| Description: | aurora kinase A [Source:HGNC Symbol;Acc:11393] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 24:41585940..41600617(-) |
>ENSCAFG00000029331
TCAGGCATTATGGACAAATCTAAAGAAAACTGCATTGCAGGGCCTGTTAAGACTGCAATTGCACTTGGTGATGGTCCAAA
ACGTGTTCTGGTGACTCAGCAAGTTCCTTCACAGAATCCATTATCTGCAAATAGTGGCCAGGCCCAGCGGGTCTTGTGTC
CTTCAAATTCTTCCCAGCGAGTTCCTCCACAAACCCAAAAGCTCGTCTCCAGCCATAAACCGGCTCAGAATCTGAAGCAG
AAGCAATTGCAGGCAACTGGTGTCCCTCGTCCTGCCTCTAGGTCACTGAATAATACCCAAAAGAGTGAGCAACCCTCGTC
ATCAGCCCCTGGAAATAATTCTGAAAAGGAACTGGCAACAAAACAGAAAAATGAAGAATCAAAAAAAAGGCAATGGGCTT
TGGAAGATTTTGAAATTGGTCGCCCACTGGGTAAAGGAAAGTTTGGTAATGTTTACTTGGCAAGGGAAAAACAAAGCAAG
TTTATCCTGGCTATTAAAGTATTATTTAAAGCTCAACTGGAGAAAGCAGGAGTTGAACATCAGCTGAGAAGAGAAGTAGA
AATACAGTCCCACCTTAGGCATCCAAATATTCTTAGGCTGTATGGTTATTTCCATGATGCCACCAGAGTTTACCTAATTC
TAGAATATGCACCTCTTGGAGCTGTCTACAGAGAACTTCAGAAACTGTCAAAGTTTGATGAGCAGAGAACTGCTACTTAT
ATCACAGAGTTGGCAGATGCCCTGTCTTACTGTCACTCAAAGAGAGTCATTCACAGAGACATTAAGCCAGAGAACCTACT
CCTTGGATCAGCTGGAGAGCTTAAGATTGCAGATTTTGGGTGGTCAGTACATGCTCCATCCTCCAGGAGAACCACCCTGT
GTGGCACCCTGGATTACTTGCCCCCAGAGATGATTGAAGGCCGAATGCATGATGAGAAGGTGGATCTCTGGAGCCTTGGG
GTTCTTTGCTATGAATTTCTAGTTGGGAAGCCTCCTTTTGAGGCAAGCACATACCAAGAGACCTACAAAAGAATATCACG
GGTTGAATTCACATTCCCTGACTTCGTGCCGGAGGGAGCCAGGGATCTCATTTCAAGACTGTTGAAACATAATCCCAGCC
AAAGGCCAACTCTCAAGGATGTACTTGAACACCCGTGGATCATGGCTAACTCATCAAAACCATCAAGTAGCCAAAAAAAC
AAAGACTCAACTAGCAAACAGTCTTAA
TCAGGCATTATGGACAAATCTAAAGAAAACTGCATTGCAGGGCCTGTTAAGACTGCAATTGCACTTGGTGATGGTCCAAA
ACGTGTTCTGGTGACTCAGCAAGTTCCTTCACAGAATCCATTATCTGCAAATAGTGGCCAGGCCCAGCGGGTCTTGTGTC
CTTCAAATTCTTCCCAGCGAGTTCCTCCACAAACCCAAAAGCTCGTCTCCAGCCATAAACCGGCTCAGAATCTGAAGCAG
AAGCAATTGCAGGCAACTGGTGTCCCTCGTCCTGCCTCTAGGTCACTGAATAATACCCAAAAGAGTGAGCAACCCTCGTC
ATCAGCCCCTGGAAATAATTCTGAAAAGGAACTGGCAACAAAACAGAAAAATGAAGAATCAAAAAAAAGGCAATGGGCTT
TGGAAGATTTTGAAATTGGTCGCCCACTGGGTAAAGGAAAGTTTGGTAATGTTTACTTGGCAAGGGAAAAACAAAGCAAG
TTTATCCTGGCTATTAAAGTATTATTTAAAGCTCAACTGGAGAAAGCAGGAGTTGAACATCAGCTGAGAAGAGAAGTAGA
AATACAGTCCCACCTTAGGCATCCAAATATTCTTAGGCTGTATGGTTATTTCCATGATGCCACCAGAGTTTACCTAATTC
TAGAATATGCACCTCTTGGAGCTGTCTACAGAGAACTTCAGAAACTGTCAAAGTTTGATGAGCAGAGAACTGCTACTTAT
ATCACAGAGTTGGCAGATGCCCTGTCTTACTGTCACTCAAAGAGAGTCATTCACAGAGACATTAAGCCAGAGAACCTACT
CCTTGGATCAGCTGGAGAGCTTAAGATTGCAGATTTTGGGTGGTCAGTACATGCTCCATCCTCCAGGAGAACCACCCTGT
GTGGCACCCTGGATTACTTGCCCCCAGAGATGATTGAAGGCCGAATGCATGATGAGAAGGTGGATCTCTGGAGCCTTGGG
GTTCTTTGCTATGAATTTCTAGTTGGGAAGCCTCCTTTTGAGGCAAGCACATACCAAGAGACCTACAAAAGAATATCACG
GGTTGAATTCACATTCCCTGACTTCGTGCCGGAGGGAGCCAGGGATCTCATTTCAAGACTGTTGAAACATAATCCCAGCC
AAAGGCCAACTCTCAAGGATGTACTTGAACACCCGTGGATCATGGCTAACTCATCAAAACCATCAAGTAGCCAAAAAAAC
AAAGACTCAACTAGCAAACAGTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 1 .98 RPM |
| SRP017611_kidney | 1 .85 RPM |
| SRP017611_liver | 1 .09 RPM |
| SRP012049_cerebellum | 4 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000023297 | within_species_paralog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005976 | ortholog_one2one | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000006633 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000024493 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000087586 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007197 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007925 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000070 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027496 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007029 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004441 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000011148 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013646 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004479 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007493 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011958 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013284 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009221 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_257 | 92.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_764 | 93.55 | 53.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1027 | 90.73 | 99.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000029331 retrocopies