Parental gene:

AURKA, ENSCAFG00000029331

Aliases:None
Description:aurora kinase A [Source:HGNC Symbol;Acc:11393]
Organism:Dog (Canis familiaris)
Coordinates:24:41585940..41600617(-)


>ENSCAFG00000029331
TCAGGCATTATGGACAAATCTAAAGAAAACTGCATTGCAGGGCCTGTTAAGACTGCAATTGCACTTGGTGATGGTCCAAA
ACGTGTTCTGGTGACTCAGCAAGTTCCTTCACAGAATCCATTATCTGCAAATAGTGGCCAGGCCCAGCGGGTCTTGTGTC
CTTCAAATTCTTCCCAGCGAGTTCCTCCACAAACCCAAAAGCTCGTCTCCAGCCATAAACCGGCTCAGAATCTGAAGCAG
AAGCAATTGCAGGCAACTGGTGTCCCTCGTCCTGCCTCTAGGTCACTGAATAATACCCAAAAGAGTGAGCAACCCTCGTC
ATCAGCCCCTGGAAATAATTCTGAAAAGGAACTGGCAACAAAACAGAAAAATGAAGAATCAAAAAAAAGGCAATGGGCTT
TGGAAGATTTTGAAATTGGTCGCCCACTGGGTAAAGGAAAGTTTGGTAATGTTTACTTGGCAAGGGAAAAACAAAGCAAG
TTTATCCTGGCTATTAAAGTATTATTTAAAGCTCAACTGGAGAAAGCAGGAGTTGAACATCAGCTGAGAAGAGAAGTAGA
AATACAGTCCCACCTTAGGCATCCAAATATTCTTAGGCTGTATGGTTATTTCCATGATGCCACCAGAGTTTACCTAATTC
TAGAATATGCACCTCTTGGAGCTGTCTACAGAGAACTTCAGAAACTGTCAAAGTTTGATGAGCAGAGAACTGCTACTTAT
ATCACAGAGTTGGCAGATGCCCTGTCTTACTGTCACTCAAAGAGAGTCATTCACAGAGACATTAAGCCAGAGAACCTACT
CCTTGGATCAGCTGGAGAGCTTAAGATTGCAGATTTTGGGTGGTCAGTACATGCTCCATCCTCCAGGAGAACCACCCTGT
GTGGCACCCTGGATTACTTGCCCCCAGAGATGATTGAAGGCCGAATGCATGATGAGAAGGTGGATCTCTGGAGCCTTGGG
GTTCTTTGCTATGAATTTCTAGTTGGGAAGCCTCCTTTTGAGGCAAGCACATACCAAGAGACCTACAAAAGAATATCACG
GGTTGAATTCACATTCCCTGACTTCGTGCCGGAGGGAGCCAGGGATCTCATTTCAAGACTGTTGAAACATAATCCCAGCC
AAAGGCCAACTCTCAAGGATGTACTTGAACACCCGTGGATCATGGCTAACTCATCAAAACCATCAAGTAGCCAAAAAAAC
AAAGACTCAACTAGCAAACAGTCTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 4 .79 RPM
SRP017611_brain 1 .98 RPM
SRP017611_kidney 1 .85 RPM
SRP017611_liver 1 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000023297 within_species_paralog 1 retrogene
retro_cfam_1177,
Choloepus hoffmanni ENSCHOG00000005976 ortholog_one2one 8 retrogenes
retro_chof_1302, retro_chof_1575, retro_chof_1709, retro_chof_2213, retro_chof_2389, retro_chof_259, retro_chof_565, retro_chof_764,
Cavia porcellus ENSCPOG00000006633 ortholog_one2many 1 retrogene
retro_cpor_106,
Felis catus ENSFCAG00000024493 ortholog_one2one 1 retrogene
retro_fcat_495,
Homo sapiens ENSG00000087586 ortholog_one2one 1 retrogene
retro_hsap_510,
Gorilla gorilla ENSGGOG00000007197 ortholog_one2one 1 retrogene
retro_ggor_470,
Myotis lucifugus ENSMLUG00000007925 ortholog_one2one 1 retrogene
retro_mluc_1931,
Macaca mulatta ENSMMUG00000000070 ortholog_one2one 1 retrogene
retro_mmul_431,
Mus musculus ENSMUSG00000027496 ortholog_one2one 1 retrogene
retro_mmus_2825,
Nomascus leucogenys ENSNLEG00000007029 ortholog_one2one 1 retrogene
retro_nleu_1553,
Otolemur garnettii ENSOGAG00000004441 ortholog_one2many 3 retrogenes
retro_ogar_2805, retro_ogar_3440, retro_ogar_980,
Pongo abelii ENSPPYG00000011148 ortholog_one2one 1 retrogene
retro_pabe_231,
Pan troglodytes ENSPTRG00000013646 ortholog_one2one 1 retrogene
retro_ptro_381,
Rattus norvegicus ENSRNOG00000004479 ortholog_one2one 2 retrogenes
retro_rnor_664, retro_rnor_670,
Sus scrofa ENSSSCG00000007493 ortholog_one2many 1 retrogene
retro_sscr_936,
Ictidomys tridecemlineatus ENSSTOG00000011958 ortholog_one2one 2 retrogenes
retro_itri_366, retro_itri_772,
Tupaia belangeri ENSTBEG00000013284 ortholog_one2one 2 retrogenes
retro_tbel_1137, retro_tbel_2604,
Tarsius syrichta ENSTSYG00000009221 ortholog_one2one 1 retrogene
retro_tsyr_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_257 92.70 100.00
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2. retro_cfam_764 93.55 53.19
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3. retro_cfam_1027 90.73 99.75
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Download FASTA sequences of all ENSCAFG00000029331 retrocopies