RetrogeneDB ID: | retro_chof_2524 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_8236:24270..24701(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MAD2L1 | ||
Ensembl ID: | ENSCHOG00000012813 | ||
Aliases: | None | ||
Description: | MAD2 mitotic arrest deficient-like 1 (yeast) [Source:HGNC Symbol;Acc:6763] |
Percent Identity: | 72.3 % |
Parental protein coverage: | 71.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VTTDPELIKYLNNVVEQLKXXXXXXXXXXXXXXXXXIESGEVLERWQFDIECDKTAKDESAPREKSQKAI |
..TDPELIKYLNN.VEQLK.................IESG...ERWQFD.ECDKTAKDESAPREKSQK.I | |
Retrocopy | LATDPELIKYLNNMVEQLKDCLCKCSVQKLVVVISIIESG---ERWQFDTECDKTAKDESAPREKSQKTI |
Parental | QDEIRSVIRQITATVTFLPLL-EVS-SFDLLIYTDKDLVVPEKWEESGPQFITNSEEVRLRSFTTTIHKV |
QDE..SVI.QI.ATVTFLP.L.EVS.SF.LLIYTDKDLVVPEKWEESGPQFI..SEEV.L.SFTTT.H.V | |
Retrocopy | QDETHSVISQIIATVTFLPQL<EVSCSFELLIYTDKDLVVPEKWEESGPQFIASSEEVHLCSFTTTSHRV |
Parental | NSTVAYKI |
NS.V.YKI | |
Retrocopy | NSMVVYKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |