RetrogeneDB ID: | retro_dord_119 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_3625:73499..73910(-) | ||
Located in intron of: | ENSDORG00000005193 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.4 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGD-VDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRI |
.VPL..YMRIYKKGD.VDIK.M.TVQK.MPHKCYH.KTGRVYNVTQHAVGIVVNKQVK...L.KRINV.I | |
Retrocopy | IVPLGPYMRIYKKGDIVDIKRMSTVQKEMPHKCYHSKTGRVYNVTQHAVGIVVNKQVKVRVLLKRINVYI |
Parental | EHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA |
EHIKHSKS.DSFLK.VKEN.QKKKEAKEKGTWVQLK.QPAPPRE.HFVRTN.KEPELLEPIPYEF.A | |
Retrocopy | EHIKHSKS*DSFLKQVKENEQKKKEAKEKGTWVQLKHQPAPPREVHFVRTNKKEPELLEPIPYEFTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |