RetrogeneDB ID: | retro_dord_186 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_4850:1383983..1384330(-) | ||
Located in intron of: | ENSDORG00000014622 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.39 % |
Parental protein coverage: | 84.56 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | LATYMRIYKKGD-VDIKGMGTVQKGMPHKCYHGKTGRV-YNVTQHAVGIVVNKQVKGKILAKRINVRIEH |
L.TYM...KKGD.V.IK.M.T.QKGM.H.CYHGKTGR..YNVTQ.AVG..VNKQVK.K.LAKRINV.IE. | |
Retrocopy | LVTYMLS*KKGDMVHIKRMSTIQKGMCHNCYHGKTGRA<YNVTQCAVGTAVNKQVKSKNLAKRINVHIEF |
Parental | IKHSK-SRDSFLKRVKENDQKKKEAKE-KGTWVQLKRQPAPPREAHFVR |
.KH...S.DSF.K.VK.N.QK.KEAK..KG...QLK.QPA..RE..FVR | |
Retrocopy | SKHTR<SQDSFQKSVKKN*QKNKEAKV>KGH*NQLKHQPALLRETYFVR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |