RetrogeneDB ID: | retro_dord_348 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_133:173370..173772(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.06 % |
Parental protein coverage: | 97.79 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGD-VDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRI |
VVPL.TYMRIYKKG..VDIKG.GT.QKGMPH.C.HGKT.RVY.VTQHA.GIVVN.QVKGKILAKRINVRI | |
Retrocopy | VVPLDTYMRIYKKGNTVDIKGIGTAQKGMPHQC*HGKTRRVYSVTQHALGIVVN*QVKGKILAKRINVRI |
Parental | EHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE |
EHIKHSKS.DSFLKRVKENDQKKKEA.EKGTWV.LK.QPAPPREAHFVRTN.KEPELLEPIPYE | |
Retrocopy | EHIKHSKSQDSFLKRVKENDQKKKEAREKGTWV*LKHQPAPPREAHFVRTN*KEPELLEPIPYE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |