RetrogeneDB ID: | retro_dord_152 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_3930:143824..144229(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.86 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGD-VDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRI |
VVPLATYMRIYKK.D.VDIKGMG.V.K.MPHKCYHGKTGRVYNVTQHA.GIVVNKQVK.KILAK.INV.I | |
Retrocopy | VVPLATYMRIYKKSDSVDIKGMGVV*KEMPHKCYHGKTGRVYNVTQHAIGIVVNKQVKDKILAKGINVHI |
Parental | EHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA |
EHIKHSKS.DSFL..VKEND..KKEAKEKG.WVQLK.QPA.PREAHFVRTNGKEPE.LEPIPYEFMA | |
Retrocopy | EHIKHSKSGDSFL--VKEND*EKKEAKEKGSWVQLKCQPALPREAHFVRTNGKEPEQLEPIPYEFMA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |