RetrogeneDB ID: | retro_dord_493 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_23372:16036..16446(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VVPLATYMRIYKKGDV-DIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRI |
VVPLATYM.IYKKG...D.KGMGTVQKGMPHKC..GKTGRVYNVTQHAVGIVVNKQVKG..LA..INV.I | |
Retrocopy | VVPLATYMKIYKKGGIADLKGMGTVQKGMPHKC*NGKTGRVYNVTQHAVGIVVNKQVKGTVLANGINVCI |
Parental | EHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVR-TNGKEPELLEPIPYEFMA |
E..KHSKS.DSFLK.VKENDQKKKEAKEK.TWVQLK.QP.PPREAHFV..TNGKEPELLEPIPYEFMA | |
Retrocopy | ERTKHSKSQDSFLK*VKENDQKKKEAKEKETWVQLKHQPTPPREAHFVK<TNGKEPELLEPIPYEFMA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |