RetrogeneDB ID: | retro_dord_189 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_4881:350678..350949(+) | ||
Located in intron of: | ENSDORG00000009248 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000002226 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 53.19 % |
Parental protein coverage: | 66.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | VYNVTQHAVGIVVNKQV-KGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEK-GTWVQLKRQ |
.YN.T........N..V.KGK.LAK.INV..EHIK.S.S..SFLK..KENDQ.....KEK.G.WVQLK.. | |
Retrocopy | IYNFTSLLLALL-NSEV>KGKTLAKKINVHFEHIKYSQSQLSFLKYMKENDQ*QMKSKEK<GPWVQLKCK |
Parental | PAPPREA-HFVRTNGKEPELLEPI |
.....EA..FVR..G...ELLEPI | |
Retrocopy | STLSIEA>FFVRFQGNKLELLEPI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |