RetrogeneDB ID: | retro_dord_430 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_18024:6786..7026(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Rps27a | ||
Ensembl ID: | ENSDORG00000006291 | ||
Aliases: | None | ||
Description: | ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:1925544] |
Percent Identity: | 73.17 % |
Parental protein coverage: | 74.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK-QLEDG-RTLSDYNIQKESTLH |
MQIF.KTL..KTITL.V...DTIENVKAKIQ.K.GI.P.QQRLIFAGK.QLEDG..TLSDYNIQKESTL. | |
Retrocopy | MQIFTKTLSRKTITLKVKVLDTIENVKAKIQKKDGILPGQQRLIFAGK>QLEDG<NTLSDYNIQKESTLY |
Parental | LVLRLRGGAKKR |
L.L.L.G..K.. | |
Retrocopy | LLLGLCGARKNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |