RetrogeneDB ID: | retro_etel_2119 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_65563:640..916(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000017747 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1D | ||
Ensembl ID: | ENSETEG00000014857 | ||
Aliases: | None | ||
Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
Percent Identity: | 63.83 % |
Parental protein coverage: | 98.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIREHMNRVKEITDKKKASKLDKGAASR |
L.PLE.A.V.L.S.YTLNS....YL.T.GV.P....VKQ.LE.I.E.MNRVKEI..K.KASKL.K..A.R | |
Retrocopy | LAPLEKATVGLLSVYTLNSR--AYLTTKGVKPNKYAVKQKLEQIKEYMNRVKEIKYKTKASKLGKSIAVR |
Parental | FVKNALWEPKPKIASKVAKKGKSK |
FVKN.LWEPKPK..SKVA..GKS. | |
Retrocopy | FVKNTLWEPKPKNTSKVASEGKSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |