RetrogeneDB ID: | retro_etel_2163 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_81558:1016..1256(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000010418 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1D | ||
Ensembl ID: | ENSETEG00000014857 | ||
Aliases: | None | ||
Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
Percent Identity: | 60.49 % |
Parental protein coverage: | 84.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LDPLEQAKVDLVSAYTLNSM-FWVYLATQGVNPKEHPVKQELERIREHMNRVKEITDKKKASKLDKGAAS |
LDPLEQ.KVD..SAYT.NSM.F.V.L..Q.VNPKEHPVKQELERIREHMNR.KEI............... | |
Retrocopy | LDPLEQTKVDFISAYT*NSMLFGVHLDAQEVNPKEHPVKQELERIREHMNRGKEIPN-REGRQAGQRCRC |
Parental | RFVKNALWEPK |
..VK..L..PK | |
Retrocopy | EVVKTSLTQPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |