RetrogeneDB ID: | retro_ocun_142 | ||
Retrocopylocation | Organism: | Rabbit (Oryctolagus cuniculus) | |
Coordinates: | 1:1683370..1683796(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOCUG00000025587 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOCUG00000009771 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGEEINEDYPVEIHEYLSAFENSISTVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVY |
MAGEEINEDYPVEIHEYLSAFENSISTVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVY | |
Retrocopy | MAGEEINEDYPVEIHEYLSAFENSISTVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVY |
Parental | LATQGVNPKEHPVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVKNALWEPKPKNASKVASKGKNK |
LATQGVNPKEHPVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVKNALWEPKPKNASKVASKGKNK | |
Retrocopy | LATQGVNPKEHPVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVKNALWEPKPKNASKVASKGKNK |
Parental | H |
H | |
Retrocopy | H |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .11 RPM | 3 .15 RPM |
SRP017611_kidney | 0 .00 RPM | 1 .72 RPM |
SRP017611_liver | 0 .00 RPM | 0 .46 RPM |