RetrogeneDB ID: | retro_ttru_1192 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_106871:48840..49231(+) | ||
Located in intron of: | ENSTTRG00000016423 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1D | ||
Ensembl ID: | ENSTTRG00000013982 | ||
Aliases: | None | ||
Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
Percent Identity: | 75.94 % |
Parental protein coverage: | 74.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | RGLNIMAGEEINEDYPVEIH-EYLSTFENSIGAVDEMLKTMMSVSRNEL--LQKLDPLEQAKVDLVSAYT |
R.L.IMAGEEINEDYPVE.H..YLSTFENS.GAVDE.LKT..SVSRNEL........L...KVDLVS.YT | |
Retrocopy | RELVIMAGEEINEDYPVERH<RYLSTFENSTGAVDETLKTVTSVSRNELRCCRSWTHLNERKVDLVSTYT |
Parental | LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDR-AAASRFVKNALWE |
L.S.FWVYLATQG.NPKEHPVKQELERI.VYMNRVK.ITD.K.AGKLD....ASRFVKNALWE | |
Retrocopy | LHSVFWVYLATQGINPKEHPVKQELERIGVYMNRVKDITDEKDAGKLDG<GVASRFVKNALWE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |