RetrogeneDB ID: | retro_etel_2192 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_95044:6980..7348(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000010361 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008408 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.6 % |
Parental protein coverage: | 70.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCG |
CY.CGESGHLAKDCDLQEDAC.NCG.GGH.AKD.KEPKRE.EQCC.NCG.PGH.A.DCDHAD.Q.....G | |
Retrocopy | CYPCGESGHLAKDCDLQEDACSNCG*GGHSAKDRKEPKRESEQCCCNCGTPGHPALDCDHADGQSA-TLG |
Parental | EFGHIQKDCTK-VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA |
E.G.IQKDCT...K.YRCGETGHVAINCSK.SEVNCY..G.SG.LA.ECTIEATA | |
Retrocopy | ESGRIQKDCTG<GKSYRCGETGHVAINCSKASEVNCYHWGKSGCLAQECTIEATA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |