RetrogeneDB ID: | retro_etel_237 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4022:3514..3956(-) | ||
Located in intron of: | ENSETEG00000000386 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008408 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78. % |
Parental protein coverage: | 82.49 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | RGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQED-ACYNCGRGGHIA-KDCKEPK-REREQCC |
RGRG.....RGFQFVSSSLPD.CY.CGESGHLAKDCDLQED.AC.NC.RGGHIA......P..RER.QCC | |
Retrocopy | RGRGMRSRGRGFQFVSSSLPDLCYHCGESGHLAKDCDLQEDEACSNCDRGGHIA>RTARSPS>RERAQCC |
Parental | YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEV-NCYRCGESGHL |
YNCGKPG.LARD.DHADEQ.CYSCGEFGHIQKD.TKVKCYRCGETG.VA.NCSKTSEV...YR.GESGHL | |
Retrocopy | YNCGKPGRLARDRDHADEQTCYSCGEFGHIQKDYTKVKCYRCGETGRVASNCSKTSEV<QVYRRGESGHL |
Parental | ARECTIEATA |
A.ECT.E..A | |
Retrocopy | AQECTTETSA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |