RetrogeneDB ID: | retro_etel_471 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7781:135129..135383(-) | ||
Located in intron of: | ENSETEG00000007800 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LAMTOR3 | ||
Ensembl ID: | ENSETEG00000009065 | ||
Aliases: | None | ||
Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] |
Percent Identity: | 77.27 % |
Parental protein coverage: | 68.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | APEHALRPGF-LSTFALATDQGSKLGLSKN-KSIICYYNTYQVVQFNRLPLVVSFIASS-NANTGLIVSL |
APEHALRPGF.L.TFALATDQG.KLGLSK..KSI.CYYN.YQVVQFNR.P..VSFIASS..AN.GL.VSL | |
Retrocopy | APEHALRPGF<LPTFALATDQGRKLGLSKH>KSITCYYNPYQVVQFNRFPWAVSFIASS<QANRGLMVSL |
Parental | EKELAPLFEELRQVVEVS |
EKE..PLFE.LR..VE.S | |
Retrocopy | EKEHLPLFEALRHAVEAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |