RetrogeneDB ID: | retro_etel_727 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_15587:779..1040(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 62.92 % |
Parental protein coverage: | 82.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | ANKTHTLCRRCGSKAYHL-QKSTCGKCGYPAKR-KRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR |
.NK.H.LC..CGSK.Y...QKSTCGK...PAK..KRKYN...KAKR.N..GTG.M..LKIVY.RFRHGF. | |
Retrocopy | SNKMHRLCGNCGSKVYCF>QKSTCGKHASPAKA<KRKYN*NVKAKRQNNNGTGWMKYLKIVYCRFRHGFY |
Parental | EGTTPK-PKRAAVAASSSS |
EGTT....KR.A.A..SSS | |
Retrocopy | EGTTAN*AKRSAIATYSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |