Parental gene:

RPL37, ENSBTAG00000005142

Aliases:None
Description:60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P79244]
Organism:Cow (Bos taurus)
Coordinates:20:33667204..33669805(+)


>ENSBTAG00000005142
ATGACGAAGGGAACGTCATCGTTTGGAAAGCGTCGGAATAAGACGCACACGCTGTGCCGCCGTTGTGGCTCTAAGGCCTA
CCACCTTCAGAAGTCGACCTGTGGCAAGTGTGGCTACCCTGCCAAGCGAAAGAGAAAGTATAATTGGAGTGCTAAAGCTA
AAAGACGAAATACCACCGGGACTGGTAGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGTGAA
GGAACAACACCTAAACCCAAGCGAGCGGCTGTTGCAGCATCCAGTTCATCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 61 .35 RPM
SRP017611_kidney 98 .21 RPM
SRP017611_liver 73 .62 RPM
ERP005899_muscle 610 .98 RPM
ERP005899_liver 74 .98 RPM
SRP030211_testis 64 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015424 possible_ortholog 14 retrogenes
retro_amel_1101, retro_amel_1370, retro_amel_1461, retro_amel_1603, retro_amel_167, retro_amel_181, retro_amel_1824, retro_amel_207, retro_amel_237, retro_amel_277, retro_amel_701, retro_amel_888, retro_amel_910, retro_amel_916,
Callithrix jacchus ENSCJAG00000007388 ortholog_one2one 10 retrogenes
retro_cjac_107, retro_cjac_1443, retro_cjac_169, retro_cjac_2091, retro_cjac_2443, retro_cjac_247, retro_cjac_2495, retro_cjac_2654, retro_cjac_2956, retro_cjac_332,
Equus caballus ENSECAG00000026905 possible_ortholog 5 retrogenes
retro_ecab_323, retro_ecab_354, retro_ecab_411, retro_ecab_420, retro_ecab_896,
Echinops telfairi ENSETEG00000003463 possible_ortholog 23 retrogenes
retro_etel_1003, retro_etel_1030, retro_etel_118, retro_etel_1195, retro_etel_1317, retro_etel_132, retro_etel_1414, retro_etel_1506, retro_etel_1664, retro_etel_1717, retro_etel_1832, retro_etel_1920, retro_etel_201, retro_etel_300, retro_etel_311, retro_etel_360, retro_etel_484, retro_etel_501, retro_etel_572, retro_etel_66, retro_etel_727, retro_etel_732, retro_etel_763,
Gorilla gorilla ENSGGOG00000003241 possible_ortholog 19 retrogenes
retro_ggor_1002, retro_ggor_1100, retro_ggor_1452, retro_ggor_1488, retro_ggor_1558, retro_ggor_1643, retro_ggor_1670, retro_ggor_2025, retro_ggor_2169, retro_ggor_2246, retro_ggor_2256, retro_ggor_2436, retro_ggor_2629, retro_ggor_2660, retro_ggor_2909, retro_ggor_362, retro_ggor_490, retro_ggor_718, retro_ggor_769,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Loxodonta africana ENSLAFG00000030052 ortholog_one2many 13 retrogenes
retro_lafr_1101, retro_lafr_1123, retro_lafr_1125, retro_lafr_1136, retro_lafr_215, retro_lafr_374, retro_lafr_448, retro_lafr_507, retro_lafr_532, retro_lafr_619, retro_lafr_775, retro_lafr_985, retro_lafr_986,
Macropus eugenii ENSMEUG00000011938 possible_ortholog 3 retrogenes
retro_meug_1060, retro_meug_1633, retro_meug_255,
Macaca mulatta ENSMMUG00000023807 possible_ortholog 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Mus musculus ENSMUSG00000041841 ortholog_one2one 28 retrogenes
retro_mmus_1333, retro_mmus_1360, retro_mmus_1425, retro_mmus_1560, retro_mmus_1717, retro_mmus_1732, retro_mmus_1804, retro_mmus_1813, retro_mmus_2067, retro_mmus_2379, retro_mmus_2385, retro_mmus_2513, retro_mmus_2559, retro_mmus_2575, retro_mmus_2691, retro_mmus_2811, retro_mmus_2838, retro_mmus_3090, retro_mmus_3222, retro_mmus_3343, retro_mmus_3345, retro_mmus_3364, retro_mmus_3455, retro_mmus_3493, retro_mmus_3503, retro_mmus_3504, retro_mmus_3674, retro_mmus_438,
Oryctolagus cuniculus ENSOCUG00000029674 ortholog_one2one 11 retrogenes
retro_ocun_1063, retro_ocun_1269, retro_ocun_1476, retro_ocun_1491, retro_ocun_1514, retro_ocun_1870, retro_ocun_295, retro_ocun_683, retro_ocun_771, retro_ocun_879, retro_ocun_956,
Otolemur garnettii ENSOGAG00000034300 possible_ortholog 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Procavia capensis ENSPCAG00000007672 possible_ortholog 5 retrogenes
retro_pcap_252, retro_pcap_270, retro_pcap_349, retro_pcap_436, retro_pcap_53,
Pteropus vampyrus ENSPVAG00000000921 possible_ortholog 8 retrogenes
retro_pvam_1048, retro_pvam_1070, retro_pvam_1478, retro_pvam_315, retro_pvam_49, retro_pvam_738, retro_pvam_803, retro_pvam_844,
Rattus norvegicus ENSRNOG00000012538 ortholog_one2many 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,
Sarcophilus harrisii ENSSHAG00000013969 possible_ortholog 4 retrogenes
retro_shar_295, retro_shar_350, retro_shar_395, retro_shar_715,
Sus scrofa ENSSSCG00000025883 ortholog_one2one 5 retrogenes
retro_sscr_1004, retro_sscr_1220, retro_sscr_1221, retro_sscr_767, retro_sscr_872,
Tarsius syrichta ENSTSYG00000006208 possible_ortholog 21 retrogenes
retro_tsyr_1113, retro_tsyr_1206, retro_tsyr_144, retro_tsyr_1722, retro_tsyr_1893, retro_tsyr_1969, retro_tsyr_201, retro_tsyr_216, retro_tsyr_296, retro_tsyr_307, retro_tsyr_324, retro_tsyr_356, retro_tsyr_426, retro_tsyr_53, retro_tsyr_572, retro_tsyr_682, retro_tsyr_744, retro_tsyr_783, retro_tsyr_829, retro_tsyr_86, retro_tsyr_914,
Tursiops truncatus ENSTTRG00000010926 possible_ortholog 7 retrogenes
retro_ttru_1712, retro_ttru_1905, retro_ttru_191, retro_ttru_242, retro_ttru_425, retro_ttru_828, retro_ttru_970,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_181 97.94 100.00
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2. retro_btau_243 82.47 100.00
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3. retro_btau_1430 82.89 78.35
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4. retro_btau_1502 79.27 82.47
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5. retro_btau_1575 53.93 88.66
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6. retro_btau_1670 85.00 82.47
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Download FASTA sequences of all ENSBTAG00000005142 retrocopies