RetrogeneDB ID: | retro_lafr_1089 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_68:2384872..2385518(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSLAFG00000026806 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSLAFG00000004944 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.65 % |
Parental protein coverage: | 86.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKT--EGAEKKQQMAREYREKIETELRDICND |
VTE....LSNE.RNLLSVAYKNVVGARRSSWRV.SSIEQKT...G.EKK......YREKIE.EL...CND | |
Retrocopy | VTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCND |
Parental | VLSLLEKFLIPNAS--QAESKVFYLKMKGDYYRYLAEVAAGDDKK-GIVDQSQQAYQEAFEISKKEMQPT |
VL.LL.KFLI.N....Q.ESKVFYLKMKGDYYRYLAEVA.G...K...V..S..AY.EAFEISK..MQPT | |
Retrocopy | VLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASG-ERK>SVVEASEAAYKEAFEISKEHMQPT |
Parental | HPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ |
HPIRLGLALNFSVFYYEI.N.PE.AC.LAK.AFD.AIAELDTL.E.SYKDSTLIMQLLRDNLTLWTSD.Q | |
Retrocopy | HPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ |
Parental | GDEAEAG |
..EA..G | |
Retrocopy | DEEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |