RetrogeneDB ID: | retro_ttru_455 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2344:530876..531604(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTTRG00000015906 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 85.89 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MDKNE-LVQKAKLAEQAERYDDMAACMKSVTEQG-AELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQK |
MDKNE..VQK.K.AEQAER.DD.AA.MKSVTEQ..AELSNEERNLLSVAYKNVVGA.RS.W.VVSS.E.K | |
Retrocopy | MDKNE<VVQKDKVAEQAERDDDVAARMKSVTEQE<AELSNEERNLLSVAYKNVVGACRSPWSVVSSTEKK |
Parental | TEGAEKKQQMAR-EYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDD |
.EGAE.K.Q....E..EKIETEL..ICNDVLS.LEKFLIP.ASQAESKVFYLKMKG.YYRYLAEV.AGD. | |
Retrocopy | MEGAE-KKQQMA>EKTEKIETELKGICNDVLSHLEKFLIPSASQAESKVFYLKMKGGYYRYLAEVVAGDE |
Parental | KKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLS |
KKGIVDQSQQAYQ.AFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLS | |
Retrocopy | KKGIVDQSQQAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLS |
Parental | EESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN |
EESYKDSTLIMQLLRD.LTLWTSDTQGD.AEAG.G.EN | |
Retrocopy | EESYKDSTLIMQLLRDTLTLWTSDTQGDKAEAG-GEEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |