RetrogeneDB ID: | retro_meug_1544 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold446796:376..704(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMEUG00000008917 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 71.68 % |
Parental protein coverage: | 70.51 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | GKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISR |
GK..EDG.TLSDY..QKESTL..VLRLRGGAKKRKK.SYTTPKKNK.KRKKVK..VLK...VDENG..S. | |
Retrocopy | GK*MEDGLTLSDYTTQKESTLQFVLRLRGGAKKRKK-SYTTPKKNKCKRKKVKFTVLKSSTVDENGTVSH |
Parental | LR-RECP-SDECGAGVFMASHFDRHYC-GKCCLTYCFNKPEDK |
.R....P.S.EC.AGVF.AS.FDRH...GKCCL.YCFN.PEDK | |
Retrocopy | FR<KRVPFSGECRAGVFIASYFDRHCM<GKCCLSYCFNRPEDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |