Parental gene:

ENSLAFG00000023133

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_52:6750701..6752954(-)


>ENSLAFG00000023133
CAGGTTGAGCCCTCGGATACGATAGAAAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCAAGCGCTGGATTCCTCCTGA
CCAGCAGAGGTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACCTTGTCTGACTACAACATTCAAAAGGAGTCCA
CTCTTCATCTTGTCTTGAGACTTCGTGGTGGTGCTAAGAAAAGAAAGAAGAAGTCTTACACTACTCCCAAGAAGAATAAG
CATAAGAGAAAGAAGGTTAAGCTGGCTGTCCTAAAATACTACAAGGTGGATGAGAATGGCAAAATCAGTCGGCTTCGTCG
GGAGTGCCCTTCAGATGAGTGTGGTGCTGGGGTTTTTATGGCCAGCCACTTCGATAGACATTACTGTGGCAAGTGTTGTC
TGACCTATTGCTTCAACAAACCAGAAGACAAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004017 possible_ortholog 5 retrogenes
retro_amel_1565, retro_amel_175, retro_amel_598, retro_amel_661, retro_amel_844,
Bos taurus ENSBTAG00000015473 possible_ortholog 6 retrogenes
retro_btau_1115, retro_btau_1213, retro_btau_1631, retro_btau_395, retro_btau_440, retro_btau_664,
Canis familiaris ENSCAFG00000023471 possible_ortholog 3 retrogenes
retro_cfam_1048, retro_cfam_640, retro_cfam_81,
Callithrix jacchus ENSCJAG00000010052 possible_ortholog 5 retrogenes
retro_cjac_200, retro_cjac_229, retro_cjac_344, retro_cjac_74, retro_cjac_88,
Cavia porcellus ENSCPOG00000005819 possible_ortholog 7 retrogenes
retro_cpor_1040, retro_cpor_1433, retro_cpor_406, retro_cpor_409, retro_cpor_502, retro_cpor_591, retro_cpor_990,
Dasypus novemcinctus ENSDNOG00000004813 ortholog_one2one 12 retrogenes
retro_dnov_131, retro_dnov_1340, retro_dnov_1432, retro_dnov_1558, retro_dnov_1664, retro_dnov_2022, retro_dnov_2183, retro_dnov_2576, retro_dnov_2635, retro_dnov_491, retro_dnov_538, retro_dnov_771,
Equus caballus ENSECAG00000018773 possible_ortholog 3 retrogenes
retro_ecab_341, retro_ecab_748, retro_ecab_776,
Erinaceus europaeus ENSEEUG00000002329 ortholog_one2one 9 retrogenes
retro_eeur_127, retro_eeur_143, retro_eeur_193, retro_eeur_283, retro_eeur_289, retro_eeur_308, retro_eeur_58, retro_eeur_629, retro_eeur_72,
Felis catus ENSFCAG00000023939 possible_ortholog 1 retrogene
retro_fcat_1542,
Homo sapiens ENSG00000143947 possible_ortholog 10 retrogenes
retro_hsap_1694, retro_hsap_1715, retro_hsap_2217, retro_hsap_2416, retro_hsap_276, retro_hsap_3344, retro_hsap_3508, retro_hsap_4272, retro_hsap_4649, retro_hsap_4650,
Gorilla gorilla ENSGGOG00000007678 possible_ortholog 9 retrogenes
retro_ggor_1290, retro_ggor_1291, retro_ggor_1502, retro_ggor_1749, retro_ggor_179, retro_ggor_203, retro_ggor_2373, retro_ggor_2858, retro_ggor_2885,
Macropus eugenii ENSMEUG00000008917 possible_ortholog 13 retrogenes
retro_meug_107, retro_meug_1184, retro_meug_1460, retro_meug_1514, retro_meug_1544, retro_meug_1657, retro_meug_183, retro_meug_1866, retro_meug_209, retro_meug_521, retro_meug_594, retro_meug_937, retro_meug_94,
Myotis lucifugus ENSMLUG00000017064 possible_ortholog 10 retrogenes
retro_mluc_1201, retro_mluc_1255, retro_mluc_1298, retro_mluc_1646, retro_mluc_1730, retro_mluc_1865, retro_mluc_1867, retro_mluc_2264, retro_mluc_37, retro_mluc_380,
Myotis lucifugus ENSMLUG00000029449 possible_ortholog 1 retrogene
retro_mluc_1585,
Macaca mulatta ENSMMUG00000015563 possible_ortholog 8 retrogenes
retro_mmul_1198, retro_mmul_193, retro_mmul_2189, retro_mmul_222, retro_mmul_2470, retro_mmul_282, retro_mmul_606, retro_mmul_73,
Monodelphis domestica ENSMODG00000001819 possible_ortholog 3 retrogenes
retro_mdom_1367, retro_mdom_1751, retro_mdom_205,
Mustela putorius furo ENSMPUG00000010468 possible_ortholog 6 retrogenes
retro_mputfur_1512, retro_mputfur_242, retro_mputfur_319, retro_mputfur_332, retro_mputfur_499, retro_mputfur_777,
Mus musculus ENSMUSG00000020460 possible_ortholog 19 retrogenes
retro_mmus_1074, retro_mmus_1268, retro_mmus_1440, retro_mmus_1441, retro_mmus_1815, retro_mmus_1917, retro_mmus_2043, retro_mmus_2092, retro_mmus_2098, retro_mmus_2449, retro_mmus_2514, retro_mmus_2785, retro_mmus_2801, retro_mmus_2931, retro_mmus_306, retro_mmus_318, retro_mmus_3234, retro_mmus_3292, retro_mmus_3391,
Oryctolagus cuniculus ENSOCUG00000003613 possible_ortholog 10 retrogenes
retro_ocun_1087, retro_ocun_1163, retro_ocun_1209, retro_ocun_1259, retro_ocun_1268, retro_ocun_1339, retro_ocun_164, retro_ocun_288, retro_ocun_381, retro_ocun_851,
Ochotona princeps ENSOPRG00000010469 possible_ortholog 13 retrogenes
retro_opri_1056, retro_opri_1120, retro_opri_162, retro_opri_177, retro_opri_191, retro_opri_331, retro_opri_472, retro_opri_490, retro_opri_582, retro_opri_71, retro_opri_717, retro_opri_801, retro_opri_871,
Pongo abelii ENSPPYG00000025871 possible_ortholog 1 retrogene
retro_pabe_117,
Pan troglodytes ENSPTRG00000011928 possible_ortholog 1 retrogene
retro_ptro_32,
Pteropus vampyrus ENSPVAG00000016471 possible_ortholog 3 retrogenes
retro_pvam_1052, retro_pvam_676, retro_pvam_952,
Rattus norvegicus ENSRNOG00000004426 possible_ortholog 2 retrogenes
retro_rnor_117, retro_rnor_161,
Sus scrofa ENSSSCG00000022357 possible_ortholog 1 retrogene
retro_sscr_145,
Ictidomys tridecemlineatus ENSSTOG00000009566 possible_ortholog 5 retrogenes
retro_itri_1583, retro_itri_1765, retro_itri_26, retro_itri_635, retro_itri_962,
Tarsius syrichta ENSTSYG00000000845 possible_ortholog 14 retrogenes
retro_tsyr_107, retro_tsyr_122, retro_tsyr_1379, retro_tsyr_1493, retro_tsyr_1520, retro_tsyr_1877, retro_tsyr_1890, retro_tsyr_1892, retro_tsyr_1950, retro_tsyr_2121, retro_tsyr_339, retro_tsyr_767, retro_tsyr_855, retro_tsyr_879,
Tursiops truncatus ENSTTRG00000013947 possible_ortholog 5 retrogenes
retro_ttru_1199, retro_ttru_1279, retro_ttru_533, retro_ttru_705, retro_ttru_838,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_185 71.92 100.00
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2. retro_lafr_1122 73.79 100.00
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Download FASTA sequences of all ENSLAFG00000023133 retrocopies