RetrogeneDB ID: | retro_meug_1460 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold41301:22521..22973(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMEUG00000008917 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 99.36 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTL.GKTITL.VE.SDTIE.VKAKIQDKEGIPPD.QRL.F.GK.LE.GRTL.DYNIQKESTLHL. | |
Retrocopy | MQIFVKTLMGKTITLDVELSDTIETVKAKIQDKEGIPPDHQRLVFSGKELEEGRTLADYNIQKESTLHLA |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE-CPSDECGAGVFMASHFDRH |
LRLRGGA.K........P..N.H.RKK.K..V.K...V.E..KIS.L....CPSD..G..V....HFD.. | |
Retrocopy | LRLRGGARKKN----AIPRENNHNRKKAKPPVVKHSNVEETRKISHLHQA<CPSDQYGTAVSVDHHFDLV |
Parental | YCGKCCLTYCFNKPED |
Y.GKCCLTYCFNK..D | |
Retrocopy | YWGKCCLTYCFNKSGD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |