RetrogeneDB ID: | retro_meug_594 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold143184:223..505(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSMEUG00000008917 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 74.74 % |
Parental protein coverage: | 60.9 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKK |
GK.I.LEVEPSDT.E.VKAKIQ.KE.I.P.QQRLIFA.K.L.DG.TLS.YNIQKESTLH.VLRL.GGAKK | |
Retrocopy | GKNISLEVEPSDTSEDVKAKIQGKEDITPNQQRLIFASKKLKDGHTLSYYNIQKESTLHIVLRLHGGAKK |
Parental | RKKKSYTTPKKNKHKRKKVKLAVLK |
R.KKSYTTP......RKK.KL.VLK | |
Retrocopy | R-KKSYTTPPXXXN*RKKGKLVVLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |