RetrogeneDB ID: | retro_mluc_1429 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429836:3837753..3838093(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000023772 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RANBP1 | ||
Ensembl ID: | ENSMLUG00000017535 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.05 % |
Parental protein coverage: | 55.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | AAKDTHEDHDTSTENADESNHDPQFEPIVSL-PEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERG |
A.KD.HEDHDTS.ENADESNH.PQF.PIVSL..EQEIKTLE.DEE.LFKMRAKLFRF.SEN..PEW.ERG | |
Retrocopy | ATKDIHEDHDTSIENADESNHNPQFKPIVSL<SEQEIKTLE-DEEKLFKMRAKLFRFTSENNFPEWEERG |
Parental | TGDVK-LLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSD |
TGDVK..LKHK.KGTIRLLMRRD.TLKICAN.YI.PMMELKPN.G.D | |
Retrocopy | TGDVK<VLKHKGKGTIRLLMRRDETLKICANNYIMPMMELKPNTGND |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000010749 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000002962 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000011317 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000015996 | 2 retrocopies | |
Homo sapiens | ENSG00000099901 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000000784 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000016620 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000017535 | 1 retrocopy |
retro_mluc_1429 ,
|
Macaca mulatta | ENSMMUG00000020100 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000010312 | 5 retrocopies | |
Mus musculus | ENSMUSG00000005732 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000005684 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000034333 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000011593 | 4 retrocopies | |
Rattus norvegicus | ENSRNOG00000001884 | 4 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000006873 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000026840 | 2 retrocopies |