RetrogeneDB ID: | retro_mluc_2604 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL431535:22236..22773(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C11ORF58 | ||
Ensembl ID: | ENSMLUG00000001589 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.24 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MSAARESHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTG |
MSAA.ES.PH.VK.SASPDDDLGS.NWEA.DLGNEERKQKFLRLMG.GKKEHTG..VIGDHKST.HF.TG | |
Retrocopy | MSAAKESRPHWVKHSASPDDDLGSRNWEATDLGNEERKQKFLRLMGTGKKEHTGHFVIGDHKSTFHF*TG |
Parental | EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGD-VAGDDDDDDDSPDPESPDDSESDS |
EEDKKI.EELESQYQQSMD.KLSGRYRRHCGLGFSEVEDH.GE......D.DD..DSPDPESPDDSESDS | |
Retrocopy | EEDKKISEELESQYQQSMDNKLSGRYRRHCGLGFSEVEDH-GEDH>AGDDGDD--DSPDPESPDDSESDS |
Parental | ESEKEESAEELQAPEHPDEEEDPKNK-KDAKSNYKMMFVKSSGS |
ESEKEES.EELQAPEHP.E..DPKNK.KDAKSNYKM.FVKSSGS | |
Retrocopy | ESEKEESVEELQAPEHPGEVKDPKNK<KDAKSNYKMTFVKSSGS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000030220 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000009626 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000009679 | 2 retrocopies | |
Equus caballus | ENSECAG00000011778 | 1 retrocopy | |
Felis catus | ENSFCAG00000027747 | 1 retrocopy | |
Homo sapiens | ENSG00000110696 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000011795 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000001589 | 1 retrocopy |
retro_mluc_2604 ,
|
Monodelphis domestica | ENSMODG00000007147 | 2 retrocopies | |
Mus musculus | ENSMUSG00000030663 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000017719 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000025335 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000000154 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000003458 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000020436 | 1 retrocopy |