Parental gene:

1110004F10Rik, ENSMUSG00000030663

Aliases:1110004F10Rik, Smacp, Smap, sid2057, sid2057p
Description:RIKEN cDNA 1110004F10 gene [Source:MGI Symbol;Acc:MGI:1929274]
Organism:Mouse (Mus musculus)
Coordinates:7:116093300..116105210(+)


>ENSMUSG00000030663
ATGAGTGCTGCCCGGGAGTCTCACCCGCACGGGGTGAAACGTTCAGCCTCCCCCGACGACGATCTTGGATCTAGCAATTG
GGAGGCAGCAGACTTAGGCAATGAAGAAAGAAAACAAAAGTTCTTGAGACTCATGGGTGCAGGAAAGAAAGAACACACTG
GTCGTCTTGTTATAGGAGATCACAAATCAACATCTCACTTCCGAACAGGGGAAGAAGACAAGAAAATTAATGAAGAGCTG
GAGTCTCAGTACCAGCAGAGCATGGACAGCAAACTGTCAGGACGGTACCGGCGGCACTGCGGCCTCGGCTTCAGTGAGGT
AGAAGATCATGATGGAGAAGGTGATGTGGCTGGAGATGACGATGAGGACGACTCCCCTGATGCTGAGAGTCCAGATGACT
CGGACAGTGACTCTGAGTCTGAGAAGGAGGAGTCTGCAGAAGAGCTTCATGCTGCTGAGCATCCTGACGACACAGAAGAC
CCGAAGAGCAAAAAAGATGCGAAGAGCAATTATAAGATGATGTTTGTCAAGTCCAGTGGCTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 49 .51 RPM
SRP007412_cerebellum 52 .11 RPM
SRP007412_heart 33 .03 RPM
SRP007412_kidney 39 .06 RPM
SRP007412_liver 27 .50 RPM
SRP007412_testis 45 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030220 ortholog_one2many 2 retrogenes
retro_cfam_160, retro_cfam_717,
Callithrix jacchus ENSCJAG00000009626 ortholog_one2one 1 retrogene
retro_cjac_3098,
Cavia porcellus ENSCPOG00000009679 ortholog_one2one 2 retrogenes
retro_cpor_1331, retro_cpor_772,
Equus caballus ENSECAG00000011778 ortholog_one2one 1 retrogene
retro_ecab_269,
Felis catus ENSFCAG00000027747 ortholog_one2one 1 retrogene
retro_fcat_2016,
Homo sapiens ENSG00000110696 ortholog_one2one 2 retrogenes
retro_hsap_1408, retro_hsap_3898,
Macropus eugenii ENSMEUG00000011795 ortholog_one2one 1 retrogene
retro_meug_1432,
Myotis lucifugus ENSMLUG00000001589 ortholog_one2one 1 retrogene
retro_mluc_2604,
Monodelphis domestica ENSMODG00000007147 ortholog_one2one 2 retrogenes
retro_mdom_1249, retro_mdom_672,
Nomascus leucogenys ENSNLEG00000017719 ortholog_one2one 1 retrogene
retro_nleu_1425,
Otolemur garnettii ENSOGAG00000025335 ortholog_one2one 2 retrogenes
retro_ogar_1613, retro_ogar_2569,
Ochotona princeps ENSOPRG00000000154 ortholog_one2one 1 retrogene
retro_opri_761,
Pongo abelii ENSPPYG00000003458 ortholog_one2one 2 retrogenes
retro_pabe_1166, retro_pabe_3178,
Rattus norvegicus ENSRNOG00000020436 ortholog_one2one 1 retrogene
retro_rnor_622,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2190 71.43 96.35
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2. retro_mmus_2616 82.07 100.00
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Download FASTA sequences of all ENSMUSG00000030663 retrocopies