RetrogeneDB ID: | retro_mluc_76 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429866:3325293..3326175(+) | ||
Located in intron of: | ENSMLUG00000011632 | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000026663 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000011660 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.58 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MADDAGAAGGPGGPGGPGLGGRGGFRGGFGSGIRGRGRGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLV |
MADDAGAAGGPGGPGGPGLGGRGGFRGGFGSGIRGRGRGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLV | |
Retrocopy | MADDAGAAGGPGGPGGPGLGGRGGFRGGFGSGIRGRGRGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLV |
Parental | KDMKIKSLEEIYLFSLPIKESEIIDFFLGTSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLG |
KDMKIKSLEEIYLFSLPIKESEIIDFFLGTSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLG | |
Retrocopy | KDMKIKSLEEIYLFSLPIKESEIIDFFLGTSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLG |
Parental | VKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVP |
VKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVP | |
Retrocopy | VKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVP |
Parental | KKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQVLPSPTTLLTNAN |
KKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ.........T... | |
Retrocopy | KKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF-TDHLVKTHTR |
Parental | ASVQRTQAPAVATT |
.SVQRTQAPAVATT | |
Retrocopy | VSVQRTQAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000002549 | 1 retrocopy | |
Bos taurus | ENSBTAG00000009535 | 7 retrocopies | |
Loxodonta africana | ENSLAFG00000004696 | 11 retrocopies | |
Macropus eugenii | ENSMEUG00000004508 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000011660 | 1 retrocopy |
retro_mluc_76 ,
|
Monodelphis domestica | ENSMODG00000016077 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015547 | 11 retrocopies | |
Procavia capensis | ENSPCAG00000002090 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015213 | 5 retrocopies | |
Tursiops truncatus | ENSTTRG00000011393 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000006867 | 6 retrocopies |