RetrogeneDB ID: | retro_mputfur_1391 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897107.1:1345587..1346385(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000015547 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.93 % |
Parental protein coverage: | 99.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MADDAGAAGGPGGPGG-PGMGGRGGFRGGFG-SGIRGRGRGRGRGRGRGRGARGGKAEDKEWIPVTKLGR |
M.DDAGA.GGP.GPG..PGMGGRG.FR.GF..SGIRG.GRG.G.GRGRGRGA....AEDKEWIPVTKLGR | |
Retrocopy | MVDDAGAEGGPKGPGS<PGMGGRGRFRRGFA<SGIRGQGRGGGCGRGRGRGAHRVTAEDKEWIPVTKLGR |
Parental | LVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG |
LVKDMKIKSL.EIYLFSLPIKESEIIDFFLGASLKDEVLKIMPV.KQTRAGQ.TRFKAFVAIGDYNGHVG | |
Retrocopy | LVKDMKIKSLAEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVKKQTRAGQQTRFKAFVAIGDYNGHVG |
Parental | LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPA-PRGTGIVSA |
LGVKCSKEVATAIRGAIILAKLSIVPVRRGY.GNKIGKP.TVPCKVTGRC.SVLV.LIPA.PRGTGIVSA | |
Retrocopy | LGVKCSKEVATAIRGAIILAKLSIVPVRRGY*GNKIGKPYTVPCKVTGRCDSVLVCLIPA>PRGTGIVSA |
Parental | PVPKK-LLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ |
PVPK..L.M.AGIDDCYTSAR.CTATLGNFAKATF.AISKTYSYLTPDLWKETVFTKSPYQ | |
Retrocopy | PVPKT>LMM-AGIDDCYTSARSCTATLGNFAKATFEAISKTYSYLTPDLWKETVFTKSPYQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000002549 | 1 retrocopy | |
Bos taurus | ENSBTAG00000009535 | 7 retrocopies | |
Loxodonta africana | ENSLAFG00000004696 | 11 retrocopies | |
Macropus eugenii | ENSMEUG00000004508 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000011660 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000016077 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015547 | 11 retrocopies | |
Procavia capensis | ENSPCAG00000002090 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000015213 | 5 retrocopies | |
Tursiops truncatus | ENSTTRG00000011393 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000006867 | 6 retrocopies |