RetrogeneDB ID: | retro_mputfur_874 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896963.1:4744285..4744873(-) | ||
Located in intron of: | ENSMPUG00000017191 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Apool | ||
Ensembl ID: | ENSMPUG00000001899 | ||
Aliases: | None | ||
Description: | apolipoprotein O-like [Source:MGI Symbol;Acc:MGI:1915367] |
Percent Identity: | 79.7 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LPIYTAPPLQSKYVEEQPGHLQRGFASIRSTTGHYIGWCKGVYVFMKNGIMDTVQFGKDAYIYLKNPPQD |
LP..TAPPLQ.K.VEEQPGHLQ.G.ASI..TTGHYIGWC..VYVF.KNGIM.TVQFGKDAYI.LK.PPQ. | |
Retrocopy | LPTQTAPPLQFKHVEEQPGHLQMGLASICTTTGHYIGWCNSVYVFVKNGIMGTVQFGKDAYISLKDPPQ- |
Parental | FLPK-LGVITVSALAGLVSARKXSRFKKIAYPLGLATLGATVCYPVQSVIIAKVTGEKAYTVSQQIYGAV |
..PK..G.ITVS.LAG.VSARK.SRFKKIAYPLGLA.LGATVCYPVQSVIIAKVTG.KAY..SQQIY.AV | |
Retrocopy | --PK>VGEITVSGLAGVVSARKGSRFKKIAYPLGLASLGATVCYPVQSVIIAKVTGKKAYPTSQQIYEAV |
Parental | KSLRTKSNKEESLPKPKEKSKLGNSATLEIPEKTTDS-LKYSVSLPAELSSETKTKSESTSG |
KSL.TK.NK.ES.PKPKEKSKLGNSA..E.P.KTTDS.LKYSV.LP.ELSSETK..SESTSG | |
Retrocopy | KSLWTKINK-ESFPKPKEKSKLGNSAATELPAKTTDS<LKYSVPLPTELSSETKSQSESTSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |