Parental gene:

APOOL, ENSG00000155008

Aliases:None
Description:apolipoprotein O-like [Source:HGNC Symbol;Acc:24009]
Organism:Human (Homo sapiens)
Coordinates:X:84258831..84343069(+)


>ENSG00000155008
ATGGCGGCCATCAGGATGGGAAAACTGACAACCATGCCTGCAGGTCTGATATATGCATCTGTAAGTGTACATGCAGCCAA
ACAAGAGGAATCCAAAAAGCAGCTAGTGAAACCAGAGCAGCTCCCCATATATACTGCACCACCGCTCCAGTCTAAATATG
TTGAAGAGCAGCCTGGTCATTTACAAATGGGCTTTGCTTCCATCCGCACTGCAACTGGTTGTTACATTGGCTGGTGCAAG
GGTGTTTATGTCTTTGTGAAAAATGGGATAATGGATACAGTACAATTTGGAAAAGATGCTTATGTCTATCTGAAGAATCC
TCCTCGAGATTTTCTTCCGAAAATGGGAGTTATTACAGTTTCAGGATTGGCGGGCTTGGTTTCAGCGAGAAAAGGTTCCA
AGTTTAAGAAAATTACTTATCCTCTGGGACTGGCCACTTTAGGAGCAACTGTTTGCTACCCAGTTCAGTCCGTAATAATT
GCTAAGGTAACAGCAAAAAAGGTATATGCTACAAGCCAGCAAATTTTTGGAGCAGTTAAATCATTGTGGACAAAAAGCAG
CAAAGAAGAGTCACTCCCTAAACCTAAAGAAAAAACTAAGCTAGGATCCTCTTCCGAAATAGAAGTACCTGCAAAAACAA
CTCACGTCTTGAAACACTCAGTGCCCTTGCCAACAGAACTCAGCTCTGAAGCAAAGACCAAATCAGAATCCACTTCAGGT
GCAACCCAGTTTATGCCTGACCCCAAGCTCATGGATCACGGGCAGTCCCACCCAGAAGATATAGATATGTACAGCACTAG
AAGCTGA

Library Parental gene expression (RPM)
bodymap2_liver 4 .61 RPM
bodymap2_lung 3 .39 RPM
bodymap2_breast 5 .60 RPM
bodymap2_adipose 4 .19 RPM
bodymap2_adrenal 5 .20 RPM
bodymap2_skeletal_muscle 5 .07 RPM
bodymap2_thyroid 6 .06 RPM
bodymap2_prostate 3 .93 RPM
bodymap2_colon 3 .54 RPM
bodymap2_testis 2 .45 RPM
bodymap2_brain 6 .28 RPM
bodymap2_heart 11 .58 RPM
bodymap2_white_blood_cells 2 .95 RPM
bodymap2_lymph_node 2 .12 RPM
bodymap2_ovary 3 .91 RPM
bodymap2_kidney 4 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000829 ortholog_one2one 1 retrogene
retro_amel_1035,
Canis familiaris ENSCAFG00000017383 ortholog_one2one 1 retrogene
retro_cfam_1490,
Callithrix jacchus ENSCJAG00000008249 ortholog_one2one 2 retrogenes
retro_cjac_1783, retro_cjac_2464,
Dipodomys ordii ENSDORG00000011045 ortholog_one2one 1 retrogene
retro_dord_373,
Equus caballus ENSECAG00000009229 ortholog_one2one 1 retrogene
retro_ecab_577,
Homo sapiens ENSG00000184831 within_species_paralog 5 retrogenes
retro_hsap_1018, retro_hsap_1693, retro_hsap_2670, retro_hsap_3047, retro_hsap_3259,
Gorilla gorilla ENSGGOG00000016329 ortholog_one2one 1 retrogene
retro_ggor_2213,
Loxodonta africana ENSLAFG00000008844 ortholog_one2one 1 retrogene
retro_lafr_1035,
Microcebus murinus ENSMICG00000015844 ortholog_one2one 1 retrogene
retro_mmur_1511,
Myotis lucifugus ENSMLUG00000011384 ortholog_one2one 1 retrogene
retro_mluc_1364,
Macaca mulatta ENSMMUG00000004335 ortholog_one2one 1 retrogene
retro_mmul_2045,
Mustela putorius furo ENSMPUG00000001899 possible_ortholog 3 retrogenes
retro_mputfur_606, retro_mputfur_734, retro_mputfur_874,
Nomascus leucogenys ENSNLEG00000002634 ortholog_one2one 1 retrogene
retro_nleu_1702,
Pongo abelii ENSPPYG00000020516 ortholog_one2one 1 retrogene
retro_pabe_2697,
Pan troglodytes ENSPTRG00000022067 ortholog_one2one 1 retrogene
retro_ptro_2200,
Sus scrofa ENSSSCG00000012459 ortholog_one2many 1 retrogene
retro_sscr_610,
Tursiops truncatus ENSTTRG00000000429 ortholog_one2one 1 retrogene
retro_ttru_1337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3253 90.61 67.54
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Download FASTA sequences of all ENSG00000155008 retrocopies