RetrogeneDB ID: | retro_nleu_22 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397291.1:19434442..19435549(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSNLEG00000018370 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000111275 | ||
Ensembl ID: | ENSNLEG00000000016 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.98 % |
Parental protein coverage: | 77.47 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA |
.AGWADK.HGKTIP.DG..F..TRHEPVGVCGQIIPWNFPL.MQ.WKL.PALATGN.VVMKVAEQTPL.A | |
Retrocopy | FAGWADKWHGKTIPMDGPAFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSA |
Parental | LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGG |
LY.A.LIKEAGFPPGVVNI..G.GPTAGAAIA.H.DVDKVAFTGSTE.G..IQ.AAG.SNLKRVTLELGG | |
Retrocopy | LYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGG |
Parental | KSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQ |
KSP.I...DADM..AVEQ.H.ALFFN.GQCCCAGSRTFV.E.IY.EF.ER.V..AK.R.VGNPF...T.Q | |
Retrocopy | KSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQ |
Parental | GPQVDETQFKKILGCINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDV-DGMTIAKEEIFGPVMQILKFK |
GPQVD..QF...LG.I..G..EGAKLLCGG.....RG.FI.PTVFG.V.D.M.IAKEEIFGPV....KFK | |
Retrocopy | GPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFK |
Parental | TIEEVVGRANNSTYGLAAAVFAKDLDKANYLSQALQVGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYG |
.IEEV..RANN..YGLAAAVF..DLDKA.Y..QALQ.GTVWVN.Y.......PFGG.K.SG.GRELGE.G | |
Retrocopy | KIEEVIERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDG |
Parental | LQAYTEVKTVTVKVPQKNS |
L.AYTEVKTVT.KVPQKNS | |
Retrocopy | LKAYTEVKTVTIKVPQKNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |