RetrogeneDB ID: | retro_ogar_1099 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873535.1:22543597..22544441(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000015242 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.16 % |
Parental protein coverage: | 94.97 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | QPQWVQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKVP |
Q.QWV.VRNMATLKDI.R.LKSIKNIQKIT.SMKMV.AAKYA.AERELK.A.VYGVGS.ALY.KADIK.P | |
Retrocopy | QLQWVKVRNMATLKDISR*LKSIKNIQKITRSMKMVVAAKYAQAERELKLA*VYGVGSWALYGKADIKMP |
Parental | EDKKKHLLIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGIGDKIRGILHRTHSDQ-FLVTFK |
.DKKKHL.IGVSSD.GLCGAIHSSV.KQMKNEV..LT.A.KEVM.VGIGDK.RGILHRT.S...FLVTFK | |
Retrocopy | GDKKKHLRIGVSSD*GLCGAIHSSVTKQMKNEVSVLTVARKEVMVVGIGDKVRGILHRTPSTS<FLVTFK |
Parental | EVGRKPPTFGDASVIALELLNSGYEFDEGSIIFN-RFRSVISYKTEEKPIFSLNTIASAESMSIYDDIDA |
EVGRK.PTFGD.SVIALELL..GYEFDEGSIIFN....SVI.YK.EEKPIFSLNTIASAESM..YDDIDA | |
Retrocopy | EVGRKSPTFGDVSVIALELLSFGYEFDEGSIIFN<SVKSVI-YKREEKPIFSLNTIASAESMRLYDDIDA |
Parental | DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISG |
DVLQNYQEYN.ANIIYYSLKE.TTS.QSARM.AMDNASKN.SEMI..LTLTFN.TRQAVITKELIEIIS. | |
Retrocopy | DVLQNYQEYNPANIIYYSLKEATTSKQSARMMAMDNASKNVSEMIEQLTLTFNCTRQAVITKELIEIISS |
Parental | AAALD |
A.ALD | |
Retrocopy | AVALD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |