RetrogeneDB ID: | retro_ogar_2738 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873657.1:4203286..4204003(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000032056 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000015242 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.6 % |
Parental protein coverage: | 81.21 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MFSRTGVVGLSAWAVQPQWVQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYG |
MFSRTGVVGLSAWA.QPQWVQV.NMATLKD.TR.LKSIKNIQKITKSMKMVAAAKYARAERELK.A.VY. | |
Retrocopy | MFSRTGVVGLSAWAMQPQWVQVQNMATLKDTTR*LKSIKNIQKITKSMKMVAAAKYARAERELKLALVYE |
Parental | VGSLALYEKADIKVPEDKKKHLLIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGIGDKIRGI |
VGSLALYEKADIKVPED.KKHLLI.VSSD.GLCGAIHSSVAKQ.KNEVAALTAAG.EVMIVG.GDKIRGI | |
Retrocopy | VGSLALYEKADIKVPED-KKHLLISVSSDGGLCGAIHSSVAKQVKNEVAALTAAGREVMIVGTGDKIRGI |
Parental | LHRTHSDQFLVTFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLNTIA |
.HRTHSDQF.VTF..VGRKP.T.G.ASVI..ELLNSGYEFDEGSIIFNRFRSVIS.KT.EKPIFSL..IA | |
Retrocopy | FHRTHSDQFVVTF*KVGRKPLTLGQASVI--ELLNSGYEFDEGSIIFNRFRSVISCKTAEKPIFSLSPIA |
Parental | SAESMSIYDDIDADVLQNYQEYNLANIIYYSL |
SAESMSIYDDIDADVLQN.QEYN.AN.I.YSL | |
Retrocopy | SAESMSIYDDIDADVLQNSQEYNPANTICYSL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |