RetrogeneDB ID: | retro_ogar_483 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:27331786..27332070(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000025331 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.12 % |
Parental protein coverage: | 62.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFHLVAMKFLRVTR-EHLKQHYADLKDRPFFPGLVKYMNS |
ANL..TF..I.PD.VQ.GLVGEI.K.F.QKGFH.VAMKFL.....EHLKQH..DLKD.P.FPGLVKYMNS | |
Retrocopy | ANLQCTFTTIMPDSVQCGLVGEITKGFQQKGFHPVAMKFLQASE<EHLKQHCVDLKDHPYFPGLVKYMNS |
Parental | GPVVAMVWEGLNVVKTGRVMLGETNP |
GPVVAMVWEGLNVVKTGRVMLGET.P | |
Retrocopy | GPVVAMVWEGLNVVKTGRVMLGETSP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000008022 | 3 retrocopies | |
Erinaceus europaeus | ENSEEUG00000003783 | 2 retrocopies | |
Homo sapiens | ENSG00000011052 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000016929 | 3 retrocopies | |
Mus musculus | ENSMUSG00000020857 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000025331 | 9 retrocopies |
retro_ogar_1326, retro_ogar_1875, retro_ogar_1997, retro_ogar_2373, retro_ogar_2393, retro_ogar_2779, retro_ogar_3299, retro_ogar_483 , retro_ogar_95,
|
Otolemur garnettii | ENSOGAG00000025808 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000002671 | 8 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000014470 | 3 retrocopies | |
Sus scrofa | ENSSSCG00000017591 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000013053 | 6 retrocopies |