RetrogeneDB ID: | retro_ogar_583 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873524.1:2473247..2473727(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000026446 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MPHOSPH6 | ||
Ensembl ID: | ENSOGAG00000012532 | ||
Aliases: | None | ||
Description: | M-phase phosphoprotein 6 [Source:HGNC Symbol;Acc:7214] |
Percent Identity: | 99.38 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAAERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKIIGEEHWYLDLPALTEKESFIIEEQSFLLCEDL |
MAAERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKI.GEEHWYLDLPALTEKESFIIEEQSFLLCEDL | |
Retrocopy | MAAERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKITGEEHWYLDLPALTEKESFIIEEQSFLLCEDL |
Parental | LYGRMSFRGFNPEVEKLMLQMNSKNKAEVVEDETEEADVSDEEMARRYETLVGTIGKKFAKKRDRANYEE |
LYGRMSFRGFNPEVEKLMLQMNSKNKAEVVEDETEEADVSDEEMARRYETLVGTIGKKFAKKRDRANYEE | |
Retrocopy | LYGRMSFRGFNPEVEKLMLQMNSKNKAEVVEDETEEADVSDEEMARRYETLVGTIGKKFAKKRDRANYEE |
Parental | DENGDVKPIKTKKMFLKPQD |
DENGDVKPIKTKKMFLKPQD | |
Retrocopy | DENGDVKPIKTKKMFLKPQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000127 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000016498 | 5 retrocopies | |
Dipodomys ordii | ENSDORG00000011060 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000010276 | 6 retrocopies | |
Homo sapiens | ENSG00000135698 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000001405 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000000580 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000268 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000022575 | 2 retrocopies | |
Mus musculus | ENSMUSG00000031843 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000010725 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000024341 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000012532 | 3 retrocopies |
retro_ogar_1288, retro_ogar_1382, retro_ogar_583 ,
|
Pongo abelii | ENSPPYG00000007592 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000008398 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000050087 | 6 retrocopies | |
Tupaia belangeri | ENSTBEG00000013110 | 8 retrocopies | |
Tarsius syrichta | ENSTSYG00000001928 | 2 retrocopies |