RetrogeneDB ID: | retro_sara_471 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_220112:545..965(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SAP18 | ||
Ensembl ID: | ENSSARG00000004923 | ||
Aliases: | None | ||
Description: | Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] |
Percent Identity: | 96.43 % |
Parental protein coverage: | 91.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKK |
KEPEKPIDREKTCPLLLRV.TTNN.RHHRMDE.SRGNV.SSELQIYTWMDATLKELTSLVKEVYPEARKK | |
Retrocopy | KEPEKPIDREKTCPLLLRVSTTNNSRHHRMDEYSRGNVWSSELQIYTWMDATLKELTSLVKEVYPEARKK |
Parental | GTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY |
GTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIG.YLDIAITPPNRAPPPSGRMRPY | |
Retrocopy | GTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGVYLDIAITPPNRAPPPSGRMRPY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |