RetrogeneDB ID: | retro_tbel_1173 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4008:794909..795334(+) | ||
Located in intron of: | ENSTBEG00000013241 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL5A | ||
Ensembl ID: | ENSTBEG00000011511 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] |
Percent Identity: | 81.82 % |
Parental protein coverage: | 79.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRER |
KT..LYQFSMNEVVHTSPT.GSNVEE.VVN.T.FLM.D.GGQESL.SSWNT.Y.NTE.VI.VVDSTDRER | |
Retrocopy | KTAVLYQFSMNEVVHTSPTMGSNVEERVVNKTHFLMRDMGGQESLHSSWNTHYANTELVIAVVDSTDRER |
Parental | ISVTREELYKMLA-HDLRKAGLLIFANKQDVKECMTVAEISQFLKL-TSIKDHQWHIQACCALTGEGLCQ |
ISVTREELYK..A..DLRK..LL.FANK.DVKECMT.AEISQFLKL..SIKDHQWH.QACCALTG.GLCQ | |
Retrocopy | ISVTREELYKTPAREDLRKVRLLTFANKRDVKECMTIAEISQFLKL<NSIKDHQWHSQACCALTG*GLCQ |
Parental | GLE |
GLE | |
Retrocopy | GLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |