RetrogeneDB ID: | retro_tbel_4425 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_82693:3127..3409(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS19 | ||
Ensembl ID: | ENSTBEG00000003457 | ||
Aliases: | None | ||
Description: | ribosomal protein S19 [Source:HGNC Symbol;Acc:10402] |
Percent Identity: | 93.62 % |
Parental protein coverage: | 64.83 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYG |
QQEFVRALAAFLKKS.KLKVPEWVDTVKLAKHKEL.PYDENWFYTRAASTARHLYLRGGAGVGSMTKIYG | |
Retrocopy | QQEFVRALAAFLKKSRKLKVPEWVDTVKLAKHKELVPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYG |
Parental | GRQRNGVMPSHFSRGSKSVARRVL |
G.QRNGVMPSHFS.GSKSVA.R.L | |
Retrocopy | GQQRNGVMPSHFS*GSKSVAHRIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |