RetrogeneDB ID: | retro_ttru_336 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1909:835412..835837(-) | ||
Located in intron of: | ENSTTRG00000007867 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS19 | ||
Ensembl ID: | ENSTTRG00000008278 | ||
Aliases: | None | ||
Description: | ribosomal protein S19 [Source:HGNC Symbol;Acc:10402] |
Percent Identity: | 82.99 % |
Parental protein coverage: | 99.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | PGVTVKDVNQQEFVRALAAFLKKSG-KLKVPEWV-DTVKLAKHKELAPYDENWFYTRAASTA-RHLYLRG |
PGVTVKD.NQ.EFVRALAAFL.KSG..L.VPEWV.D.VKLAKHKELAPYDENWFYTRAA.TA...L.... | |
Retrocopy | PGVTVKDGNQREFVRALAAFLRKSG<ELQVPEWV<DAVKLAKHKELAPYDENWFYTRAACTA>LYLQGSA |
Parental | GAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV |
G.G..S.TKIY.GRQRNGVMPSHF.RGSKSVARRVLQALEGL.MVEKDQDGG.KLTPQGQRDLDRI.GQV | |
Retrocopy | GVG--SVTKIYAGRQRNGVMPSHFIRGSKSVARRVLQALEGLRMVEKDQDGGHKLTPQGQRDLDRITGQV |
Parental | AAANKKH |
AAANKKH | |
Retrocopy | AAANKKH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |