RetrogeneDB ID: | retro_tsyr_286 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_7108:14937..15275(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPB2 | ||
Ensembl ID: | ENSTSYG00000008857 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155] |
Percent Identity: | 92.98 % |
Parental protein coverage: | 50.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VEQTATTANKKPGQGMPNSANTQGNATPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL |
VEQTATTANKKPGQGMPNSANTQGN.TPNPQVPDYPPNYILFLNNL.EETNEMMLSMLFNQFPGFKEVRL | |
Retrocopy | VEQTATTANKKPGQGMPNSANTQGNTTPNPQVPDYPPNYILFLNNLSEETNEMMLSMLFNQFPGFKEVRL |
Parental | VPGRHDIAFVEFE-NDGQAGAARDALQGFKITPSHAMKITYAKK |
VPGRHDIAFVEFE.ND.QAGA.RD.LQGFKIT.SHAM.ITYAKK | |
Retrocopy | VPGRHDIAFVEFE<NDEQAGAGRDVLQGFKITQSHAMRITYAKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |