RetrogeneDB ID: | retro_ttru_1545 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_115749:52424..52874(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPB2 | ||
Ensembl ID: | ENSTTRG00000006395 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155] |
Percent Identity: | 50.94 % |
Parental protein coverage: | 70.67 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQ |
.KMR....V.FKEL...T..LRQL..F...GKP...Q.AK.DSD..SKM..TFADK.KK.....AKT.EQ | |
Retrocopy | IKMRVKGSVLFKELVPLTDTLRQLKAFLSCGKPKQMQRAKPDSDVMSKMCATFADKQKK----EAKTMEQ |
Parental | TATTMNKKPGQGTPNSANTQGNAAPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPG |
T....N.......P..ANT.GN..P.P.....PPN.ILFLNN.PEET...MLS.L...F.GF.......G | |
Retrocopy | T-VAINESLVMEPPDTANT*GNSTPDPR--HFPPNCILFLNNSPEETHGVMLSALL--FSGFRTLGSIVG |
Parental | RHDIAFVEFENDGQAGAAR |
.HD.A.VEFEN.G.AG..R | |
Retrocopy | KHDTALVEFENGGLAGDVR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |