RetrogeneDB ID: | retro_ttru_516 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2554:422482..422834(-) | ||
Located in intron of: | ENSTTRG00000007518 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GOLGA7 | ||
Ensembl ID: | ENSTTRG00000003557 | ||
Aliases: | None | ||
Description: | golgin A7 [Source:HGNC Symbol;Acc:24876] |
Percent Identity: | 57.72 % |
Parental protein coverage: | 87.59 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 3 |
Parental | YSSGTRCQFQTKFPA-ELENRIDRQQFEETVRTL-NNLYAEAEKLGGQSYLEG-CLACLTAYTIFLCMET |
YSSG..C..QT.FP....EN..DRQQ..E...TL.NN.YAEAE.L.GQ..L.G.CL...TAY.IF.CME. | |
Retrocopy | YSSGIWCWSQTNFPL<DQEN*NDRQQIAERI*TL>NNTYAEAEILWGQR*LFG>CL---TAYVIF*CMEM |
Parental | HYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR |
H...V....SK.IQ.QN.K...PQGL.L...IER.L.V.EITIY.D.GMSSGR | |
Retrocopy | HIR*V*RNISKHIQAQNQKLHTPQGLILIWAIERRLEVTEITIYVD*GMSSGR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |