Parental gene:

AMTR_s00062p00036220

Aliases:None
Description:hypothetical protein
Organism:Amborella (Amborella trichopoda)
Coordinates:AmTr_v1.0_scaffold00062:278635..282151(+)


>AMTR_s00062p00036220
ATGATCTCCTTGAAACACTCTGCAGCTCCTGCTGCTTCTCATCTCATTCAACAGCGATCTCCTTTGAAGAACCCAGGTTC
ATCTTCCTTTGCCCCTCTTCTCCCCGCCAAACCCTCAAAGTCCTCTATGTTTACAGGGAAACCCCTCTATATCTCTGCAA
TTAGATCACTATGTGCATGCACTGAGCAAAAAAGCAGGGGTCTTAAGGTCAAATGCCAAGCTTATGAGGCCGATCGATCA
GAGCCTTTGCGTGAAATTCACGTCCCTGATATACAGCAGAGATCAGAAGCAGCTCAAAAGCTTAAGATCGGTATATACTT
TGCAACATGGTGGGCTTTGAATGTTGTGTTCAATATATACAACAAGAAGGTCCTTAATGCGTTCCCTTACCCATGGCTCA
CTTCCACCCTTTCTTTGGCTACTGGTTCATTAATGATGATTCTTTCATGGGCCACAAGGATCGCAGAGGCCCCCAAAACT
GATTTCGATTTCTGGAAAGCCCTTGCTCCTGTAGCCATTGCTCATACAATTGGGCACGTTGCAGCCACTGTGAGCATGTC
TAAAGTGGCGGTGTCATTTACTCACATCATAAAGAGTGCTGAGCCCGCTTTCAGTGTGTTGGTGTCGAGGTTCCTTTTGG
GTGAGACCTTTCCAGTGCCCGTTTATCTCTCACTCTTGCCCATTATAGGAGGATGTGCCTTAGCTGCTGTTACCGAGCTC
AACTTCAATATGATTGGGTTTATGGGGGCCATGATATCGAATCTGGCATTTGTGTTTCGCAACATATTCTCAAAGAGGGG
GATGAAAGGGAAGTCGGTTAGTGGGATGAATTACTACGCCTGCCTCTCCATTCTCTCTCTCCTCATTCTCACTCCTTTCG
CCATAGCTGTGGAGGGCCCCAAGATGTGGGCTGCTGGCTGGCAAAAAGCGCTCGTAGATATTGGTCCGCACTTTGTGTGG
TGGGTTGCAGCACAGAGTGTGTTCTATCACCTGTACAACCAGGTGTCTTACATGTCTTTGGACGAAATCTCTCCCCTTAC
CTTCAGCGTTGGAAACACAATGAAGAGGATATCAGTCATTGTGTCCTCTATTATCATTTTCCACACCCCAGTTCAGCCCA
TCAATGCCCTTGGTGCTGCCATTGCCATCCTTGGCACCTTCTTTTACTCTCAGAGAGAGAGAGAAAGAGAGAGAGAGAGA
GCATTCTTATAG

Species Parental gene accession Homology type Retrogenes number
Brassica oleracea Bo9g118840 ortholog_one2many 1 retrogene
retro_bole_30,
Musa acuminata GSMUA_Achr7G03380_001 ortholog_one2many 1 retrogene
retro_macu_2,
Populus trichocarpa POPTR_0001s44610 ortholog_one2many 1 retrogene
retro_ptri_19,
Physcomitrella patens PP1S70_177V6 ortholog_one2many 1 retrogene
retro_ppat_10,
Arabidopsis lyrata scaffold_802017.1 ortholog_one2one 1 retrogene
retro_alyr_24,
Solanum lycopersicum Solyc07g064270.2 ortholog_one2many 1 retrogene
retro_slyc_32,
Theobroma cacao TCM_030978 ortholog_one2one 1 retrogene
retro_tcac_18,
Vitis vinifera VIT_10s0116g00760 ortholog_one2one 1 retrogene
retro_vvin_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_atri_14 53.47 74.44
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Download FASTA sequences of all AMTR_s00062p00036220 retrocopies