Parental gene:

BGIOSGA033426

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:10:20867296..20869078(+)


>BGIOSGA033426
ATGGGCTCGCTGTCCTCTCTCGCCGCCGCGGCGGTGTTTCTCTCCCTCCTCGCCGTCGGCCACTGCGCCGCCGCCGACTT
CAACGCCACCGACGCCGACGCCGACTTCGCCGGCAACGGCGTGGACTTCAACTCCAGCGACGCCGCCGTCTACTGGGGCC
CCTGGACCAAGGCCAGGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGCCCCGACGACAACGGCGGCGCGTGCGGGTTC
AAGCACACCAACCAGTACCCGTTCATGTCGATGACCTCCTGCGGCAACCAGCCATTGTTCAAGGACGGCAAGGGATGCGG
CTCTTGCTACAAGATCAGATGCACCAAGGACCAGTCGTGCTCCGGCAGGTCGGAGACGGTGATCATCACCGACATGAACT
ACTACCCGGTGGCTCCGTTCCACTTCGACCTCAGCGGCACGGCGTTCGGCAGGCTCGCCAAGCCTGGCCTCAACGACAAG
CTGCGCCACTCCGGCATCATCGACATCGAGTTCACCAGGGTGCCATGCGAGTTCCCGGGGCTCAAGATCGGGTTCCACGT
GGAGGAGTACTCGAACCCTGTGTACTTCGCGGTGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACC
TGATGGAGTCGAAGACGGCGCACGGGCCGCCGACGGGGAGGTGGACGCCGATGAGGGAGTCGTGGGGCTCCATCTGGAGG
CTGGACACCAACCACAGGCTCCAGGCCCCCTTCTCCATCCGCATCCGCAACGAGTCCGGCAAGACGCTCGTCGCCAACAA
CGTCATCCCGGCCAACTGGAGGCCCAACACATTCTACCGCTCCTTCGTCCAGTACAGCTGA

Species Parental gene accession Homology type Retrogenes number
Zea mays GRMZM2G013002 ortholog_one2many 1 retrogene
retro_zmay_9,
Oryza longistaminata KN539761.1_FG003 ortholog_one2one 1 retrogene
retro_olon_5,
Leersia perrieri LPERR10G14060 ortholog_one2one 1 retrogene
retro_lper_25,
Oryza barthii OBART10G18180 ortholog_one2one 1 retrogene
retro_obar_7,
Oryza glumaepatula OGLUM10G18290 ortholog_one2one 1 retrogene
retro_oglu_25,
Oryza nivara ONIVA10G20720 ortholog_one2one 1 retrogene
retro_oniv_16,
Oryza glaberrima ORGLA10G0133100 ortholog_one2one 1 retrogene
retro_ogla_8,
Oryza rufipogon ORUFI10G19380 ortholog_one2one 1 retrogene
retro_oruf_30,
Oryza sativa japonica OS10G0556100 ortholog_one2one 1 retrogene
retro_osat_34,
Physcomitrella patens PP1S100_99V6 ortholog_many2many 1 retrogene
retro_ppat_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_67 73.98 68.53
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Download FASTA sequences of all BGIOSGA033426 retrocopies