Parental gene: | FAM133B, ENSCJAG00000013910 |
| Aliases: | None |
| Description: | family with sequence similarity 133, member B [Source:HGNC Symbol;Acc:28629] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:54974324..55004182(+) |
>ENSCJAG00000013910
ATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCAAGATCAAGGGGTCCAATCCAGTCTTCAGG
GCCAACAATACAGGATTATCTGAACCGACCAAGGCCTACCTGGGAAGAAGTAAAAGAGCAACTAGAAAAGAAAAAGAAAG
GCTCCAAGGCTTTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAATTAGAAAAACACAGGGAGAAATTG
TTAAGTGGAAGTGAGAGCTCATCCAAAAAAAGACAGAGAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGGTGAGCAAAAG
TTTTTCATTTTTCTAA
ATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCAAGATCAAGGGGTCCAATCCAGTCTTCAGG
GCCAACAATACAGGATTATCTGAACCGACCAAGGCCTACCTGGGAAGAAGTAAAAGAGCAACTAGAAAAGAAAAAGAAAG
GCTCCAAGGCTTTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAATTAGAAAAACACAGGGAGAAATTG
TTAAGTGGAAGTGAGAGCTCATCCAAAAAAAGACAGAGAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGGTGAGCAAAAG
TTTTTCATTTTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .29 RPM |
| SRP051959_skeletal_muscle | 5 .28 RPM |
| SRP051959_lymph_node | 12 .19 RPM |
| SRP051959_lung | 9 .39 RPM |
| SRP051959_liver | 5 .98 RPM |
| SRP051959_kidney | 9 .54 RPM |
| SRP051959_heart | 7 .23 RPM |
| SRP051959_colon | 7 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007438 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000026810 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000234545 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000029755 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005933 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019802 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000058503 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015333 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025825 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009163 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000015317 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028195 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011674 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1084 | 81.61 | 77.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1163 | 97.14 | 94.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_4095 | 83.49 | 98.20 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013910 retrocopies