Parental gene:

FAM133B, ENSCJAG00000013910

Aliases:None
Description:family with sequence similarity 133, member B [Source:HGNC Symbol;Acc:28629]
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:54974324..55004182(+)


>ENSCJAG00000013910
ATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCAAGATCAAGGGGTCCAATCCAGTCTTCAGG
GCCAACAATACAGGATTATCTGAACCGACCAAGGCCTACCTGGGAAGAAGTAAAAGAGCAACTAGAAAAGAAAAAGAAAG
GCTCCAAGGCTTTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAATTAGAAAAACACAGGGAGAAATTG
TTAAGTGGAAGTGAGAGCTCATCCAAAAAAAGACAGAGAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGGTGAGCAAAAG
TTTTTCATTTTTCTAA

Library Parental gene expression (RPM)
SRP051959_colon 7 .06 RPM
SRP051959_heart 7 .23 RPM
SRP051959_kidney 9 .54 RPM
SRP051959_liver 5 .98 RPM
SRP051959_lung 9 .39 RPM
SRP051959_lymph_node 12 .19 RPM
SRP051959_skeletal_muscle 5 .28 RPM
SRP051959_spleen 12 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007438 ortholog_one2one 1 retrogene
retro_amel_102,
Equus caballus ENSECAG00000026810 ortholog_one2one 1 retrogene
retro_ecab_95,
Homo sapiens ENSG00000234545 ortholog_one2one 4 retrogenes
retro_hsap_2336, retro_hsap_3179, retro_hsap_55, retro_hsap_577,
Loxodonta africana ENSLAFG00000029755 ortholog_one2one 1 retrogene
retro_lafr_594,
Myotis lucifugus ENSMLUG00000005933 ortholog_one2one 1 retrogene
retro_mluc_2301,
Macaca mulatta ENSMMUG00000019802 ortholog_one2one 4 retrogenes
retro_mmul_1415, retro_mmul_226, retro_mmul_420, retro_mmul_765,
Mus musculus ENSMUSG00000058503 ortholog_one2one 2 retrogenes
retro_mmus_3481, retro_mmus_3519,
Nomascus leucogenys ENSNLEG00000015333 ortholog_one2many 1 retrogene
retro_nleu_14,
Pongo abelii ENSPPYG00000025825 ortholog_one2many 1 retrogene
retro_pabe_225,
Rattus norvegicus ENSRNOG00000009163 ortholog_one2one 1 retrogene
retro_rnor_2891,
Sus scrofa ENSSSCG00000015317 ortholog_one2one 1 retrogene
retro_sscr_49,
Ictidomys tridecemlineatus ENSSTOG00000028195 ortholog_one2one 1 retrogene
retro_itri_12,
Tupaia belangeri ENSTBEG00000011674 ortholog_one2one 1 retrogene
retro_tbel_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1084 81.61 77.48
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2. retro_cjac_1163 97.14 94.59
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3. retro_cjac_4095 83.49 98.20
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Download FASTA sequences of all ENSCJAG00000013910 retrocopies