Parental gene:

ENSCJAG00000037640

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:9046266..9057144(-)


>ENSCJAG00000037640
CAATGGCACGATCTCGGCTCACCGCAACCTCCGCCTTCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTG
GGACTACAGGCACGCACCACCATGCCCAGCTAATTTTTGTATTTTTTTAAAGACAGGGTTTCACCATGTTGGTCAGGCTG
GTGCTGGTCTTGAACTCCTGACTTCAAGTGATCCACCTGCCTCAGTCTCCCAAAGTGTTGGGATTACAGGCATGAGCCAC
CGCACCTGG

Library Parental gene expression (RPM)
SRP051959_spleen 0 .29 RPM
SRP051959_skeletal_muscle 0 .17 RPM
SRP051959_lymph_node 0 .30 RPM
SRP051959_lung 0 .24 RPM
SRP051959_liver 0 .13 RPM
SRP051959_kidney 0 .22 RPM
SRP051959_heart 0 .25 RPM
SRP051959_colon 0 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001478 within_species_paralog 30 retrogenes
Callithrix jacchus ENSCJAG00000004781 within_species_paralog 25 retrogenes
Callithrix jacchus ENSCJAG00000013317 within_species_paralog 22 retrogenes
Callithrix jacchus ENSCJAG00000034074 within_species_paralog 2 retrogenes
Callithrix jacchus ENSCJAG00000034457 within_species_paralog 2 retrogenes
Callithrix jacchus ENSCJAG00000037769 within_species_paralog 2 retrogenes
Callithrix jacchus ENSCJAG00000037996 within_species_paralog 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3345 71.25 96.39
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2. retro_cjac_3347 55.56 96.39
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3. retro_cjac_3395 60.00 92.77
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4. retro_cjac_3397 60.66 72.29
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5. retro_cjac_3398 70.97 74.70
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6. retro_cjac_3410 62.30 72.29
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7. retro_cjac_3428 59.26 96.39
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8. retro_cjac_3436 75.00 85.54
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9. retro_cjac_3479 71.25 96.39
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10. retro_cjac_3496 70.00 95.18
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11. retro_cjac_3500 62.34 85.54
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12. retro_cjac_3501 50.67 89.16
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13. retro_cjac_3505 60.94 75.90
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14. retro_cjac_3523 55.56 96.39
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15. retro_cjac_3529 66.28 97.59
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16. retro_cjac_3537 60.66 72.29
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17. retro_cjac_3568 66.67 78.31
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18. retro_cjac_3587 61.11 84.34
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19. retro_cjac_3592 69.57 81.93
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20. retro_cjac_3600 67.74 73.49
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21. retro_cjac_3612 68.97 68.67
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22. retro_cjac_3638 70.59 78.31
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23. retro_cjac_3655 60.29 80.72
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24. retro_cjac_3660 60.92 97.59
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25. retro_cjac_3679 51.43 80.72
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26. retro_cjac_3698 57.41 65.06
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27. retro_cjac_3708 72.84 95.18
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28. retro_cjac_3724 70.42 81.93
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29. retro_cjac_3732 70.00 95.18
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30. retro_cjac_3746 70.59 100.00
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31. retro_cjac_3756 62.16 86.75
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32. retro_cjac_3776 55.81 100.00
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33. retro_cjac_3796 66.67 97.59
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34. retro_cjac_3802 60.49 96.39
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Download FASTA sequences of all ENSCJAG00000037640 retrocopies