Parental gene:

PCBD1, ENSCPOG00000012703

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_15:20122694..20124353(-)


>ENSCPOG00000012703
GCTGGCAAAGCCCACAGGCTGAGTGCTGAGGAGAGGGACCAGCTGCTGCCCAACCTGAGGGCTGTGGGATGGAACGAGCT
GGAAGGCCGTGATGCCATCTTCAAGCAGTTCCACTTCAAAGATTTCAACAGGGCTTTTGGCTTCATGACCAGAGTGGCCC
TGCAGGCTGAGAAGCTGGATCACCATCCTGAATGGTTTAACGTATACAACAAGGTGCACATCACCCTGAGCACCCACGAA
TGTGCGGGCCTCTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACCTAG

Library Parental gene expression (RPM)
SRP017611_liver 168 .41 RPM
SRP017611_kidney 48 .99 RPM
SRP017611_brain 6 .04 RPM
SRP040447_lung 41 .77 RPM
SRP040447_skeletal_muscle 6 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011866 ortholog_one2one 1 retrogene
retro_btau_1478,
Felis catus ENSFCAG00000001235 ortholog_one2one 1 retrogene
retro_fcat_1478,
Loxodonta africana ENSLAFG00000001397 ortholog_one2one 1 retrogene
retro_lafr_1028,
Myotis lucifugus ENSMLUG00000016074 ortholog_one2one 3 retrogenes
retro_mluc_1534, retro_mluc_2459, retro_mluc_462,
Procavia capensis ENSPCAG00000007201 ortholog_one2one 1 retrogene
retro_pcap_46,
Sus scrofa ENSSSCG00000010275 ortholog_one2one 1 retrogene
retro_sscr_744,
Takifugu rubripes ENSTRUG00000017869 ortholog_one2one 1 retrogene
retro_trub_26,
Tursiops truncatus ENSTTRG00000005775 ortholog_one2one 1 retrogene
retro_ttru_1541,
Vicugna pacos ENSVPAG00000004496 ortholog_one2one 1 retrogene
retro_vpac_69,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_61 61.70 91.26
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Download FASTA sequences of all ENSCPOG00000012703 retrocopies